Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1840858 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1840858, End: 1841211, Length: 354

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:26500:377853778538159375Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-34143
NC_002506:298868:312716312716313090375Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein3e-34143
NC_016945:300000:312731312731313057327Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-34143
NC_013205:1548500:160160016016001601971372Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Glyoxalase/bleomycin resistance protein/dioxygenase2e-1167.8
NC_017955:3545626:356346835634683563881414Modestobacter marinus, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase5e-1063.2
NC_008571:938835:101092310109231011396474Gramella forsetii KT0803, complete genomeprotein of the glyoxalase/bleomycin resistance p rotein/dioxygenase superfamily2e-0651.6