Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1821728 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1821728, End: 1821964, Length: 237

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004459:2443000:250313225031322503368237Vibrio vulnificus CMCP6 chromosome I, complete sequencehypothetical protein2e-40164
NC_013456:1843000:184642118464211846663243Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein4e-32136
NC_018678:87064:924109241092646237Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein5e-2199.4
NC_015422:3581848:359429835942983594531234Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein8e-1372.4
NC_010814:1441327:147227514722751472529255Geobacter lovleyi SZ, complete genomehypothetical protein7e-1165.9