Pre_GI: BLASTP Hits

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Query: NC_005139:1784000:1818997 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 1818997, End: 1819854, Length: 858

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007517:1998342:2012333201233320134001068Geobacter metallireducens GS-15, complete genomeDNA topoisomerase I:Restriction endonuclease3e-44179
NC_009434:1743696:174956217495621750458897Pseudomonas stutzeri A1501, complete genomeDNA topoisomerase I: restriction endonuclease1e-43177
NC_015740:1594376:160040016004001601296897Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA topoisomerase I: restriction endonuclease1e-42173
NC_007948:3541987:355217735521773553040864Polaromonas sp. JS666, complete genomerestriction endonuclease4e-41168
NC_013959:2449315:245699324569932457841849Sideroxydans lithotrophicus ES-1 chromosome, complete genomerestriction endonuclease1e-39163
NC_014307:1:355153551536378864Ralstonia solanacearum CFBP2957 chromosome, complete genomeendonuclease6e-39161
NC_015563:3266004:3281764328176432829631200Delftia sp. Cs1-4 chromosome, complete genomerestriction endonuclease2e-37155
NC_010002:4287439:429449442944944295435942Delftia acidovorans SPH-1, complete genomerestriction endonuclease3e-37155
NC_017075:3165858:318021731802173181116900Rubrivivax gelatinosus IL144, complete genomerestriction endonuclease2e-35149
NC_010688:4991410:500154050015405002376837Xanthomonas campestris pv. campestris, complete genomehypothetical protein3e-35149
NC_003295:3688000:369251136925113693356846Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN8e-34144
NC_017271:4852351:485984248598424860678837Xanthomonas campestris pv. raphani 756C chromosome, completerestriction endonuclease3e-32139
NC_006138:1571878:1585047158504715861681122Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-31136
NC_007508:5093365:510339051033905103905516Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein3e-29129
NC_002939:1480474:1494206149420614952521047Geobacter sulfurreducens PCA, complete genomeMrr restriction system protein, putative2e-25116
NC_015572:4618467:463444146344414635235795Methylomonas methanica MC09 chromosome, complete genomerestriction endonuclease1e-24114
NC_007908:1946902:195284919528491953775927Rhodoferax ferrireducens T118, complete genomerestriction endonuclease3e-21102
NC_014931:4490526:450060745006074501563957Variovorax paradoxus EPS chromosome, complete genomerestriction endonuclease4e-2098.6
NC_012491:3704000:371332737133273714043717Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-1997.4
NC_014394:1594071:160024216002421601222981Gallionella capsiferriformans ES-2 chromosome, complete genomerestriction endonuclease1e-1997.1
NC_015942:403296:412124412124413035912Acidithiobacillus ferrivorans SS3 chromosome, complete genomerestriction endonuclease1e-1894
NC_011662:535613:550402550402551355954Thauera sp. MZ1T, complete genomerestriction endonuclease1e-1790.9
NC_011761:2457560:2462775246277524640971323Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completerestriction endonuclease2e-1789.4
NC_019976:1:1002510025122742250Natronococcus occultus SP4 plasmid 2, complete sequencerestriction endonuclease7e-1478.2
NC_010678:114000:123313123313124284972Ralstonia pickettii 12J chromosome 2, complete sequenceDNA topoisomerase type IA zn finger domain protein3e-1375.9
NC_012857:557911:567107567107568078972Ralstonia pickettii 12D chromosome 2, complete genomeDNA topoisomerase type IA zn finger domain protein3e-1375.9
NC_012108:4454705:446735944673594468132774Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein2e-1272.8
NC_008346:1117802:1126703112670311279681266Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRestriction endonuclease-like protein5e-1065.1
NC_010682:1593108:1593108159310815955072400Ralstonia pickettii 12J chromosome 1, complete sequencerestriction endonuclease8e-1064.3
NC_011146:2304475:231717723171772317869693Geobacter bemidjiensis Bem, complete genomeNERD domain protein2e-0963.5
NC_016818:3736213:3745548374554837471791632Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completerestriction endonuclease1e-0860.8
NC_015388:2143329:215029721502972150755459Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeDNA topoisomerase type IA zn finger domain protein1e-0860.5
NC_008700:367949:378604378604379386783Shewanella amazonensis SB2B, complete genomeDNA topoisomerase I1e-0860.5
NC_008340:1303607:131945513194551319757303Alkalilimnicola ehrlichei MLHE-1, complete genome2e-0860.1
NC_019902:3397170:340366034036603404445786Thioalkalivibrio nitratireducens DSM 14787, complete genomeNERD domain protein2e-0859.7
NC_004459:2443000:248811324881132488760648Vibrio vulnificus CMCP6 chromosome I, complete sequenceProbable endonuclease3e-0859.3
NC_013748:24498:3187931879329281050Haloterrigena turkmenica DSM 5511 plasmid pHTUR05, completerestriction endonuclease2e-0756.6
NC_014219:3254268:326347932634793263988510Bacillus selenitireducens MLS10 chromosome, complete genomerestriction endonuclease2e-0653.1
NC_019977:1245894:1262204126220412649452742Methanomethylovorans hollandica DSM 15978, complete genomeputative endonuclease related to Holliday junction resolvase3e-0652.8
NC_012214:1117325:1123500112350011245371038Erwinia pyrifoliae Ep1/96, complete genomePutative restriction endonuclease9e-0651.2