Pre_GI: BLASTN Hits

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Query: NC_005126:5188976 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 5188976, End: 5214548, Length: 25573

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010803:11325001132500115901826519Chlorobium limicola DSM 245, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012912:24270924270927148728779Dickeya zeae Ech1591, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012912:84433984433986800523667Dickeya zeae Ech1591, complete genome6e-20107BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012779:1449500*1449500150683157332Edwardsiella ictaluri 93-146, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012779:33168773316877333727020394Edwardsiella ictaluri 93-146, complete genome1e-20109BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome1e-20109BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0971.9BLASTN svgBLASTP svg
NC_020063:1051310*1051310108258031271Enterobacteriaceae bacterium strain FGI 57, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020063:974369743612048123046Enterobacteriaceae bacterium strain FGI 57, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013961:441719*44171947879337075Erwinia amylovora, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004547:1174650*1174650121156236913Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-53216BLASTN svgBLASTP svg
NC_012214:74530274530276695921658Erwinia pyrifoliae Ep1/96, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012214:53700053700055834721348Erwinia pyrifoliae Ep1/96, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012214:474359*47435949790923551Erwinia pyrifoliae Ep1/96, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_008253:31613113161311320913747827Escherichia coli 536, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008253:28285732828573285250723935Escherichia coli 536, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004431:11665681166568119813631569Escherichia coli CFT073, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome0797BLASTN svgBLASTP svg
NC_010498:4072681*4072681409685324173Escherichia coli SMS-3-5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome0797BLASTN svgBLASTP svg
AC_000091:45693794569379459254323165Escherichia coli W3110 DNA, complete genome1e-1179.8BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome0797BLASTN svgBLASTP svg
NC_011740:448000*44800047065722658Escherichia fergusonii ATCC 35469, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009921:72492497249249727260723359Frankia sp. EAN1pec, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014366:478000*47800050156823569Gamma proteobacterium HdN1, complete genome2e-47198BLASTN svgBLASTP svg
NC_012803:361127*36112738262921503Micrococcus luteus NCTC 2665, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_011060:45961545961550472245108Pelodictyon phaeoclathratiforme BU-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012962:30600633060063308387423812Photorhabdus asymbiotica, complete genome8e-47196BLASTN svgBLASTP svg
NC_012962:10415181041518106637824861Photorhabdus asymbiotica, complete genome1e-51212BLASTN svgBLASTP svg
NC_012962:13176021317602134444626845Photorhabdus asymbiotica, complete genome3e-46194BLASTN svgBLASTP svg
NC_012962:82090982090984059919691Photorhabdus asymbiotica, complete genome8e-50206BLASTN svgBLASTP svg
NC_012962:39337153933715398542551711Photorhabdus asymbiotica, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012962:35680463568046362047652431Photorhabdus asymbiotica, complete genome7e-41176BLASTN svgBLASTP svg
NC_012962:11890211189021120825819238Photorhabdus asymbiotica, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012962:44270004427000445406927070Photorhabdus asymbiotica, complete genome5e-54220BLASTN svgBLASTP svg
NC_012962:34636443463644349841134768Photorhabdus asymbiotica, complete genome1e-39172BLASTN svgBLASTP svg
NC_012962:4591295*4591295461010018806Photorhabdus asymbiotica, complete genome08536BLASTN svgBLASTP svg
NC_012962:13646381364638138528120644Photorhabdus asymbiotica, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_012962:34999003499900355871558816Photorhabdus asymbiotica, complete genome5e-54220BLASTN svgBLASTP svg
NC_012962:86929586929589218422890Photorhabdus asymbiotica, complete genome1e-20109BLASTN svgBLASTP svg
NC_012962:16616831661683171390552223Photorhabdus asymbiotica, complete genome1e-36163BLASTN svgBLASTP svg
NC_012962:10681021068102112169753596Photorhabdus asymbiotica, complete genome5e-54220BLASTN svgBLASTP svg
NC_012962:26395002639500266574326244Photorhabdus asymbiotica, complete genome3e-49204BLASTN svgBLASTP svg
NC_012962:30307263030726305134020615Photorhabdus asymbiotica, complete genome4e-36161BLASTN svgBLASTP svg
NC_012962:25877562587756263945151696Photorhabdus asymbiotica, complete genome3e-49204BLASTN svgBLASTP svg
NC_012962:18270001827000184987822879Photorhabdus asymbiotica, complete genome2e-35159BLASTN svgBLASTP svg
NC_005126:43337674333767439509961333Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-79305BLASTN svgBLASTP svg
NC_005126:34853303485330350809922770Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-52214BLASTN svgBLASTP svg
NC_005126:34965834965840029550638Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-79305BLASTN svgBLASTP svg
NC_005126:274000*27400029651122512Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-77297BLASTN svgBLASTP svg
NC_005126:38120543812054388079068737Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-50208BLASTN svgBLASTP svg
NC_005126:89242289242291989627475Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-42182BLASTN svgBLASTP svg
NC_005126:36304593630459368847858020Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-56228BLASTN svgBLASTP svg
NC_005126:44239644423964444767223709Photorhabdus luminescens subsp. laumondii TTO1, complete genome8e-50206BLASTN svgBLASTP svg
NC_005126:16138181613818165143837621Photorhabdus luminescens subsp. laumondii TTO1, complete genome8e-50206BLASTN svgBLASTP svg
NC_005126:32049803204980322748422505Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005126:48575004857500488024422745Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-54220BLASTN svgBLASTP svg
NC_005126:14250014250016059218093Photorhabdus luminescens subsp. laumondii TTO1, complete genome9e-53216BLASTN svgBLASTP svg
NC_005126:15490661549066157724728182Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-49204BLASTN svgBLASTP svg
NC_005126:27569842756984277869021707Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-48200BLASTN svgBLASTP svg
NC_005126:4824500*4824500485430329804Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-79305BLASTN svgBLASTP svg
NC_005126:42105004210500424678336284Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-52214BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome9e-22113BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011149:30955630955633763728082Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-29137BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-0661.9BLASTN svgBLASTP svg
NC_011149:31870223187022321200624985Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-1797.6BLASTN svgBLASTP svg
NC_011149:1035990*1035990106096324974Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1591.7BLASTN svgBLASTP svg
NC_011149:22945002294500231681122312Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-1177.8BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-26127BLASTN svgBLASTP svg
NC_011149:21108612110861214483233972Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-0869.9BLASTN svgBLASTP svg
NC_011149:17106011710601173914728547Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-1177.8BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str5e-0867.9BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str2e-25125BLASTN svgBLASTP svg
NC_006905:15090931509093153636427272Salmonella enterica subsp. enterica serovar Choleraesuis str6e-20107BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-0763.9BLASTN svgBLASTP svg
NC_011083:14768941476894150250725614Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-0763.9BLASTN svgBLASTP svg
NC_011083:1323827*1323827134240718581Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-0867.9BLASTN svgBLASTP svg
NC_011083:23750612375061241289137831Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-1179.8BLASTN svgBLASTP svg
NC_011083:3915500*3915500393961024111Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,5e-1177.8BLASTN svgBLASTP svg
NC_011083:33891033891036299924090Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-30141BLASTN svgBLASTP svg
NC_011083:1173802*1173802119655222751Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-19105BLASTN svgBLASTP svg
NC_011080:11669511166951119330926359Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-19105BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-23119BLASTN svgBLASTP svg
NC_011080:33312133312135949426374Salmonella enterica subsp. enterica serovar Newport str. SL254,6e-29137BLASTN svgBLASTP svg
NC_011080:1321268*1321268133914217875Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-0867.9BLASTN svgBLASTP svg
NC_011080:23426722342672236709924428Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1179.8BLASTN svgBLASTP svg
NC_011080:14707941470794150838537592Salmonella enterica subsp. enterica serovar Newport str. SL254,1e-1179.8BLASTN svgBLASTP svg
NC_006511:1579776*1579776160172721952Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-29139BLASTN svgBLASTP svg
NC_006511:25405002540500256809927600Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-19105BLASTN svgBLASTP svg
NC_006511:1506915*1506915154594239028Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC8e-0763.9BLASTN svgBLASTP svg
NC_006511:42254554225455425318227728Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-24123BLASTN svgBLASTP svg
NC_006511:682863*68286370873225870Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-1179.8BLASTN svgBLASTP svg
NC_006511:3079512*3079512310454825037Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1281.8BLASTN svgBLASTP svg
NC_006511:1808815*1808815183245923645Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-1281.8BLASTN svgBLASTP svg
NC_010102:17031721703172172512221951Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-24121BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,6e-23117BLASTN svgBLASTP svg
NC_010102:2020762*2020762204160320842Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,3e-0971.9BLASTN svgBLASTP svg
NC_010102:17797071779707181158331877Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-0867.9BLASTN svgBLASTP svg
NC_010102:683444*68344472210838665Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,1e-1179.8BLASTN svgBLASTP svg
NC_010102:27623042762304278909926796Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-32149BLASTN svgBLASTP svg
NC_010102:16165301616530165555739028Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-1487.7BLASTN svgBLASTP svg
NC_010102:38515003851500387645224953Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-1177.8BLASTN svgBLASTP svg
NC_003198:1078113*1078113110191423802Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-1281.8BLASTN svgBLASTP svg
NC_003198:3924952*3924952395155226601Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-1385.7BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-20109BLASTN svgBLASTP svg
NC_003198:3126548*3126548315161725070Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1489.7BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0869.9BLASTN svgBLASTP svg
NC_003198:2453074*2453074247785124778Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1177.8BLASTN svgBLASTP svg
NC_003198:1621347*1621347164626724921Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-24123BLASTN svgBLASTP svg
NC_003198:3042000*3042000306436622367Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0869.9BLASTN svgBLASTP svg
NC_003198:22978372297837232227924443Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1179.8BLASTN svgBLASTP svg
NC_004631:1881214*1881214190534324130Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-1281.8BLASTN svgBLASTP svg
NC_004631:26159082615908263824422337Salmonella enterica subsp. enterica serovar Typhi Ty2, complete6e-29137BLASTN svgBLASTP svg
NC_004631:3910451*3910451393705126601Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-1385.7BLASTN svgBLASTP svg
NC_004631:3112043*3112043313711225070Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-1489.7BLASTN svgBLASTP svg
NC_004631:4661000*4661000468421223213Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-0869.9BLASTN svgBLASTP svg
NC_004631:3030580*3030580304986119282Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-0869.9BLASTN svgBLASTP svg
NC_004631:13258171325817135139825582Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-24123BLASTN svgBLASTP svg
NC_004631:685357*68535771085325497Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-1179.8BLASTN svgBLASTP svg
NC_003277:22257222574180619550Salmonella typhimurium LT2 plasmid pSLT, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_003197:3902500*3902500392838425885Salmonella typhimurium LT2, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_003197:21529942152994218696633973Salmonella typhimurium LT2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003197:23274742327474236419536722Salmonella typhimurium LT2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003197:1471349*1471349150894537597Salmonella typhimurium LT2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003197:33208633208635504122956Salmonella typhimurium LT2, complete genome2e-19105BLASTN svgBLASTP svg
NC_003197:1170746*1170746119097320228Salmonella typhimurium LT2, complete genome2e-19105BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014228:1712339*1712339175523642898Xenorhabdus nematophila ATCC 19061, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014228:35343783534378355604421667Xenorhabdus nematophila ATCC 19061, complete genome6e-26127BLASTN svgBLASTP svg
NC_014228:33915003391500342834536846Xenorhabdus nematophila ATCC 19061, complete genome6e-26127BLASTN svgBLASTP svg
NC_014228:3591758*3591758361409922342Xenorhabdus nematophila ATCC 19061, complete genome9e-90339BLASTN svgBLASTP svg
NC_015224:13910881391088142166930582Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-1179.8BLASTN svgBLASTP svg