Pre_GI: BLASTP Hits

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Query: NC_005126:5188976:5201181 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 5201181, End: 5204495, Length: 3315

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:474359:4864154864154897533339Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein01486
NC_013971:3296272:3298069329806933014343366Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein01469
NC_013961:441719:4698664698664732313366Erwinia amylovora, complete genomeprobable helicase senataxin01469
NC_011365:1969198:1978004197800419814983495Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits-like protein8e-158558
NC_012850:4422966:4435599443559944389793381Rhizobium leguminosarum bv. trifolii WSM1325, complete genomehypothetical protein6e-144512
NC_010994:57362:7167371673747533081Rhizobium etli CIAT 652, complete genomehypothetical protein1e-121438
NC_014098:2225174:2271634227163422748463213Bacillus tusciae DSM 2912 chromosome, complete genomehypothetical protein9e-112405
NC_008391:2253188:2260974226097422641443171Burkholderia cepacia AMMD chromosome 2, complete sequenceDNA helicase related protein3e-99363
NC_010617:2626000:2637509263750926407693261Kocuria rhizophila DC2201, complete genomehypothetical protein9e-95348
NC_016612:28451:3411034110377393630Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-89329
NC_017506:1222000:1235602123560212388773276Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein2e-88327
NC_008577:1455000:1468067146806714713513285Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA helicase related protein2e-86321
NC_013928:395028:3950283950283980333006Streptococcus mutans NN2025, complete genomehypothetical protein5e-85316
NC_013131:8029621:8043811804381180472843474Catenulispora acidiphila DSM 44928, complete genomeDNA helicase related protein2e-84314
NC_010125:1538335:1579832157983215824682637Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein9e-84312
NC_011595:2616861:2622022262202226252583237Acinetobacter baumannii AB307-0294, complete genomehypothetical protein4e-80300
NC_007086:2887875:2934819293481929381183300Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein9e-79296
NC_013895:117429:1505131505131536653153Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein9e-75282
NC_015977:2807782:2815176281517628183823207Roseburia hominis A2-183 chromosome, complete genomeSuperfamily I DNA and RNA helicase and helicase subunits-like protein2e-73278
NC_003902:1858349:1903554190355419066283075Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-66255
NC_007086:3118116:3133200313320031362743075Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-66254
NC_010125:1538335:1577861157786115789521092Gluconacetobacter diazotrophicus PAl 5, complete genome5e-65250
NC_003902:3666544:3710567371056737138303264Xanthomonas campestris pv. campestris str. ATCC 33913, completeDNA helicase related protein8e-65249
NC_013450:45782:4578245782489343153Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein7e-63243
NC_016609:701500:7096487096487124582811Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein7e-61236
NC_015556:2265940:2320628232062823238943267Pseudomonas fulva 12-X chromosome, complete genomeDNA helicase related protein9e-60233
NC_017068:2661419:2668272266827226701911920Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA helicase2e-53211
NC_007761:57199:6896668966705161551Rhizobium etli CFN 42, complete genome3e-45184
NC_013792:224283:2407872407872431052319Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencehypothetical protein1e-40169
NC_007508:3865000:3882470388247038841341665Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative ATP-or GTP-binding protein3e-31137
NC_010994:57362:688376883769217381Rhizobium etli CIAT 652, complete genomehypothetical protein6e-23110
NC_017328:3088907:3094241309424130977563516Shigella flexneri 2002017 chromosome, complete genomeputative superfamily I DNA helicase4e-20101
CU928145:4792703:4802695480269548062103516Escherichia coli 55989 chromosome, complete genomePutative superfamily I DNA helicase4e-20101
NC_004337:3049118:3054452305445230579673516Shigella flexneri 2a str. 301, complete genomeputative superfamily I DNA helicase4e-20101
NC_011748:4792703:4802695480269548062103516Escherichia coli 55989, complete genomePutative superfamily I DNA helicase4e-20101
NC_004741:3041294:3046628304662830501433516Shigella flexneri 2a str. 2457T, complete genomeputative superfamily I DNA helicase4e-20101
NC_019897:938921:9616169616169645642949Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein5e-20100
NC_011750:4775770:4796684479668448002113528Escherichia coli IAI39 chromosome, complete genomeputative superfamily I DNA helicase1e-1999.8
NC_016822:3420826:3422873342287334263883516Shigella sonnei 53G, complete genomesuperfamily I DNA helicase3e-1998.6
NC_007384:3383983:3396289339628933998043516Shigella sonnei Ss046, complete genomeputative superfamily I DNA helicases3e-1998.2
NC_015761:4355335:4360324436032443638393516Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-1997.8
NC_008253:4735418:4737132473713247406473516Escherichia coli 536, complete genomeputative superfamily I DNA helicases5e-1997.4
NC_007946:4779745:4780097478009747836123516Escherichia coli UTI89, complete genomeputative DNA helicase, superfamily I5e-1997.4
NC_009792:3225965:3236534323653432400493516Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1895.5
NC_010102:4745949:4750883475088347543983516Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1790.9
NC_016887:1949927:1957259195725919609063648Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein6e-1790.5
NC_013792:224283:243090243090243782693Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequencehypothetical protein1e-1689.4
NC_004556:1641985:1660432166043216640043573Xylella fastidiosa Temecula1, complete genomeDNA helicase3e-1584.7
NC_017068:2661419:2670226267022626718061581Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA helicase2e-1482.4
NC_009142:2480608:2491194249119424949223729Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein3e-1481.6
NC_015690:7785875:7838600783860078420193420Paenibacillus mucilaginosus KNP414 chromosome, complete genomeDNA helicase3e-1378.2
NC_014393:1022843:1022843102284310257462904Clostridium cellulovorans 743B chromosome, complete genomeputative DNA helicase5e-1377.8
NC_013947:3080290:3088272308827230918623591Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase C14 caspase catalytic subunit p208e-1377
NC_015385:2135456:2135456213545621384913036Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein9e-1376.6
NC_007950:109399:1114871114871154944008Polaromonas sp. JS666 plasmid 2, complete sequenceDNA topoisomerase4e-1171.2
NC_013929:7278414:7278414727841472823553942Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0965.5
NC_012803:2454380:245863324586332459169537Micrococcus luteus NCTC 2665, complete genomehypothetical protein2e-0655.5