Pre_GI: BLASTP Hits

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Query: NC_005126:4857500:4869362 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4869362, End: 4874068, Length: 4707

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014718:232832:2794672794672830123546Burkholderia rhizoxinica HKI 454 chromosome, complete genomeInsecticidal toxin complex protein TccB0775
NC_010067:660659:6651336651336696594527Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0773
NC_016818:2927500:2939775293977529442294455Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein0770
NC_016818:2927500:2958940295894029633914452Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein0765
NC_017047:2079368:2120686212068621251434458Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein0752
NC_014228:2270000:2275956227595622805814626Xenorhabdus nematophila ATCC 19061, complete genomeA component of insecticidal toxin complex (Tc) (fragment)0644
NC_007005:4810295:4810295481029548151484854Pseudomonas syringae pv. syringae B728a, complete genomeinsecticidal toxin protein, putative1e-163578
NC_014722:1552454:1566007156600715686252619Burkholderia rhizoxinica HKI 454, complete genomeInsecticidal toxin complex protein TccB3e-163577
NC_008027:713500:7222577222577268194563Pseudomonas entomophila L48, complete genomeinsecticidal toxin complex protein3e-129464
NC_014718:232832:2830092830092842351227Burkholderia rhizoxinica HKI 454 chromosome, complete genomeInsecticidal toxin complex protein TccB6e-128459
NC_013892:1503162:1524551152455115321047554Xenorhabdus bovienii SS-2004 chromosome, complete genomeinsecticidal toxin complex (Tc) protein2e-110401
NC_010159:1208699:1218662121866212222553594Yersinia pestis Angola, complete genomehypothetical protein2e-108395
NC_010634:4150763:4160712416071241642903579Yersinia pseudotuberculosis PB1/+, complete genomeputative insecticidal toxin complex protein1e-108395
NC_006155:4210606:4220555422055542241333579Yersinia pseudotuberculosis IP 32953, complete genomeputative insecticidal toxin complex protein9e-109395
NC_017265:4171500:4180344418034441839373594Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,insecticidal toxin complex subunit protein2e-108394
NC_009381:321577:3261243261243297173594Yersinia pestis Pestoides F chromosome, complete genometoxin subunit2e-108394
NC_008149:3966586:3976208397620839798013594Yersinia pestis Nepal516, complete genometoxin subunit2e-108394
NC_005810:4381182:4391145439114543947383594Yersinia pestis biovar Microtus str. 91001, complete genomeputative toxin subunit2e-108394
NC_008150:4140804:4145351414535141489443594Yersinia pestis Antiqua, complete genomeputative toxin subunit2e-108394
NC_004088:179775:1893971893971929903594Yersinia pestis KIM, complete genometoxin subunit2e-108394
NC_009708:483253:4878284878284914213594Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeinsecticidal toxin complex protein4e-107390
NC_010465:522649:5271755271755307683594Yersinia pseudotuberculosis YPIII, complete genometoxin subunit1e-106389
NC_014718:232832:2638932638932675013609Burkholderia rhizoxinica HKI 454 chromosome, complete genomeInsecticidal toxin complex protein TccB1e-106389
NC_015224:4028150:4036162403616240396923531Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative insecticidal toxin complex protein1e-106389
NC_020418:1364943:1382196138219613852793084Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-99365
NC_017160:3986844:3997917399791740000582142Yersinia pestis D182038 chromosome, complete genometoxin subunit1e-96356
NC_017154:3997810:4002357400235740044982142Yersinia pestis D106004 chromosome, complete genometoxin subunit1e-96356
NC_014029:4057696:4062243406224340643842142Yersinia pestis Z176003 chromosome, complete genometoxin subunit1e-96356
NC_007005:4992730:5000484500048450079927509Pseudomonas syringae pv. syringae B728a, complete genomeinsecticidal toxin complex protein TcdA12e-96355
NC_010830:1794559:1810234181023418199539720Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein7e-91336
NC_010162:11908749:1194435211944352119533368985Sorangium cellulosum 'So ce 56', complete genomeputative toxin subunit2e-90335
NC_009997:685726:7041007041007106936594Shewanella baltica OS195, complete genomehypothetical protein1e-86322
NC_016901:680870:7004817004817070746594Shewanella baltica OS678 chromosome, complete genomeinsecticidal toxin complex/plasmid viulence protein1e-86322
NC_010162:9351179:93551429355142936581510674Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-83311
NC_014722:1552454:1568675156867515706211947Burkholderia rhizoxinica HKI 454, complete genomeInsecticidal toxin complex protein TccB4e-57224
NC_021184:3841172:3863248386324838665713324Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein2e-36155
NC_008314:1465643:15057611505761151598110221Ralstonia eutropha H16 chromosome 2, complete sequenceinsecticidal toxin complex protein3e-36155
NC_014029:4057696:4064453406445340658351383Yersinia pestis Z176003 chromosome, complete genometoxin subunit6e-29130
NC_017154:3997810:4004567400456740059491383Yersinia pestis D106004 chromosome, complete genometoxin subunit6e-29130
NC_017160:3986844:3996466399646639978481383Yersinia pestis D182038 chromosome, complete genometoxin subunit6e-29130
NC_020418:1364943:1378454137845413799231470Morganella morganii subsp. morganii KT, complete genomehypothetical protein6e-26120
NC_021184:3841172:3855133385513338632298097Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein4e-24114