Pre_GI: BLASTP Hits

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Query: NC_005126:4333767:4354977 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4354977, End: 4355843, Length: 867

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:4333767:434760943476094348520912Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-172605
NC_005126:1265071:131050713105071311418912Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-172605
NC_005126:1613818:162829216282921629104813Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-160565
NC_005126:4210500:423519342351934236086894Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-148525
NC_005126:4210500:422632542263254227224900Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-148524
NC_005126:4333767:436516743651674366054888Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-78291
NC_010465:1790739:1795416179541618030537638Yersinia pseudotuberculosis YPIII, complete genomefilamentous haemagglutinin family outer membrane protein1e-39163