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Query: NC_005126:3812054:3850981 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3850981, End: 3852591, Length: 1611

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:2639500:2657154265715426587641611Photorhabdus asymbiotica, complete genomehypothetical protein0744
NC_005126:3812054:3825840382584038274561617Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-136485
NC_012962:2639500:2643333264333326449431611Photorhabdus asymbiotica, complete genomehypothetical protein3e-134479
NC_011283:942594:9536709536709554601791Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-70267
NC_016616:2426893:2431024243102424326521629Dechlorosoma suillum PS chromosome, complete genomePGAP1-like protein4e-58226
NC_012721:770651:7958777958777976071731Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-55218
NC_008563:3119284:3128846312884631300121167Escherichia coli APEC O1, complete genomehypothetical protein2e-51204
NC_014323:27327:3202232022337521731Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-48192
NC_014323:27327:3594935949375531605Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein6e-47189
NC_014539:1:2811528115298571743Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein5e-41169
NC_005966:3334864:3339596333959633413261731Acinetobacter sp. ADP1, complete genomehypothetical protein3e-40166
NC_003296:941920:9719669719669734591494Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSMEMBRANE PROTEIN3e-36153
NC_015856:633353:6441686441686460091842Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein9e-36151
NC_007348:2011957:2021156202115620229341779Ralstonia eutropha JMP134 chromosome 2, complete sequencehypothetical protein1e-34148
NC_014931:1642179:1657925165792516594721548Variovorax paradoxus EPS chromosome, complete genomehypothetical protein2e-32140
NC_007517:306508:3225423225423245992058Geobacter metallireducens GS-15, complete genomehypothetical protein3e-28127
NC_009075:587441:5968705968705988041935Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein4e-22106
NC_008545:115292:1152921152921172321941Burkholderia cenocepacia HI2424 plasmid 1, complete sequencehypothetical protein4e-21103
NC_006351:73000:788677886779601735Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein4e-0756.6
NC_009075:92210:982379823798911675Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein5e-0756.6
NC_015968:4117835:4129313412931341317212409Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein9e-0755.5