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Query: NC_005126:3812054:3824737 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3824737, End: 3825843, Length: 1107

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009075:587441:599284599284599838555Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein1e-0964.3
NC_014539:1:2993429934311781245Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein1e-0757.8
NC_016616:2426893:2432653243265324337531101Dechlorosoma suillum PS chromosome, complete genomehypothetical protein6e-1272.4
NC_016616:2426893:2435259243525924363621104Dechlorosoma suillum PS chromosome, complete genomehypothetical protein2e-30133
NC_016616:2426893:2436777243677724378561080Dechlorosoma suillum PS chromosome, complete genomehypothetical protein1e-1274.3
NC_016616:2426893:2433977243397724350801104Dechlorosoma suillum PS chromosome, complete genomehypothetical protein4e-34145
NC_008563:3119284:313058031305803131413834Escherichia coli APEC O1, complete genomehypothetical protein3e-1892.8
NC_014323:27327:3767837678387361059Herbaspirillum seropedicae SmR1 chromosome, complete genomesignal peptide protein7e-1168.6
NC_014323:27327:3489134891359521062Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-1169.3
NC_014323:27327:3374333743348161074Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein7e-1272
NC_011283:942594:9525869525869536921107Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-25115
NC_011283:942594:9513909513909524961107Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-25115
NC_012962:2639500:2653725265372526548131089Photorhabdus asymbiotica, complete genomehypothetical protein4e-74278
NC_012962:2639500:2656082265608226571611080Photorhabdus asymbiotica, complete genomehypothetical protein2e-74279
NC_012962:2639500:2642222264222226433401119Photorhabdus asymbiotica, complete genomehypothetical protein3e-157555
NC_012962:2639500:2654905265490526559901086Photorhabdus asymbiotica, complete genomehypothetical protein3e-69262
NC_005126:3812054:3848669384866938497181050Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein6e-161566
NC_005126:3812054:3849897384989738509881092Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-78292
NC_003296:941920:974849974849975778930Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein1e-0757.8
NC_003296:941920:9757929757929768621071Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeHYPOTHETICAL SIGNAL PEPTIDE PROTEIN2e-0860.5