Pre_GI: BLASTP Hits

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Query: NC_005126:349658:398357 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 398357, End: 398797, Length: 441

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008570:1986466:200073120007312001162432Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-32138
NC_009348:2631759:263352926335292633960432Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-31134
NC_013592:1424560:144053714405371440968432Dickeya dadantii Ech586, complete genometype VI secretion system lysozyme-related protein2e-31134
NC_013421:1143500:115983711598371160268432Pectobacterium wasabiae WPP163, complete genometype VI secretion system lysozyme-related protein2e-30130
NC_011751:256830:258677258677259102426Escherichia coli UMN026 chromosome, complete genomehypothetical protein5e-27119
NC_008253:257059:259919259919260344426Escherichia coli 536, complete genomehypothetical protein1e-26118
NC_015968:4117835:415242541524254152853429Enterobacter asburiae LF7a chromosome, complete genometype VI secretion system lysozyme-like protein5e-26116
NC_011742:258746:260593260593261018426Escherichia coli S88 chromosome, complete genomehypothetical protein9e-26115
NC_008563:258725:260572260572260997426Escherichia coli APEC O1, complete genomehypothetical protein7e-26115
NC_007946:258747:260594260594261019426Escherichia coli UTI89, complete genomehypothetical protein7e-26115
NC_011745:258727:260574260574260999426Escherichia coli ED1a chromosome, complete genomehypothetical protein7e-26115
NC_016822:267758:269612269612270025414Shigella sonnei 53G, complete genometype VI secretion system lysozyme-like protein4e-1993.2
NC_011149:1110642:111064211106421111058417Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion system lysozyme-related protein4e-1477
NC_012913:1832500:183995018399501840366417Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion system lysozyme-related protein2e-1374.3
NC_009656:3733913:374250137425013742908408Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-1271.6
NC_004578:2797493:280968628096862810093408Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein9e-1062.4