Pre_GI: BLASTP Hits

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Query: NC_005126:3485330:3504632 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3504632, End: 3504922, Length: 291

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011750:1809943:182950618295061829784279Escherichia coli IAI39 chromosome, complete genomeputative plasmid maintenance system killer protein1e-1994.7
NC_017505:1013311:101955410195541019835282Neisseria meningitidis alpha710 chromosome, complete genomePlasmid maintenance system killer protein; Toxin higB-14e-1683.6
NC_013889:1159343:117679611767961177074279Thioalkalivibrio sp. K90mix chromosome, complete genome4e-1580.1
NC_008751:1736512:175446317544631754807345Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeplasmid maintenance system killer9e-1475.5
NC_010125:381711:383753383753384043291Gluconacetobacter diazotrophicus PAl 5, complete genomeputative plasmid maintenance system killer2e-1374.3
NC_016609:4233701:426332042633204263598279Niastella koreensis GR20-10 chromosome, complete genomeplasmid maintenance system killer protein4e-1270.1
NC_015694:48344:585558556133279Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceplasmid maintenance system killer6e-0753.1
NC_011901:39215:439304393044208279Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeplasmid maintenance system killer5e-0753.1
NC_013960:2592389:25960662596066259615893Nitrosococcus halophilus Nc4 chromosome, complete genome5e-0753.1
NC_014722:1467996:147176514717651471908144Burkholderia rhizoxinica HKI 454, complete genomeKILLER PROTEIN1e-0652
NC_015410:3209954:321544532154453215615171Pseudomonas mendocina NK-01 chromosome, complete genomeproteic killer protein8e-0648.9
NC_009483:4434375:446223944622394462382144Geobacter uraniireducens Rf4 chromosome, complete genome9e-0648.9
NC_010842:2310756:231750823175082317789282Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeplasmid maintenance system killer protein9e-0648.9
NC_010602:2244729:231212223121222312403282Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'putative plasmid maintenance system killer protein9e-0648.9