Pre_GI: BLASTP Hits

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Query: NC_005126:3204980:3209051 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 3209051, End: 3209344, Length: 294

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011206:1264639:128691812869181287217300Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative transcriptional regulator2e-30130
NC_014972:1510914:152493315249331525232300Desulfobulbus propionicus DSM 2032 chromosome, complete genomeaddiction module antidote protein2e-28124
NC_009925:1003000:101152210115221011815294Acaryochloris marina MBIC11017, complete genomeaddiction module antitoxin, putative3e-28124
NC_013960:1484824:149436714943671494711345Nitrosococcus halophilus Nc4 chromosome, complete genomeaddiction module antidote protein5e-28122
NC_017059:1727095:173389717338971734196300Rhodospirillum photometricum DSM 122, complete genometranscriptional regulator6e-28122
NC_011146:3426500:343344034334403433733294Geobacter bemidjiensis Bem, complete genomeputative transcriptional regulator9e-28122
NC_007517:2870657:287595328759532876249297Geobacter metallireducens GS-15, complete genomeputative transcriptional regulator5e-27119
NC_014973:54449:647326473265025294Geobacter sp. M18 chromosome, complete genomeaddiction module antidote protein5e-27119
NC_010943:325739:337899337899338201303Stenotrophomonas maltophilia K279a, complete genomeputative HTH family transcriptional regulator4e-27119
NC_005230:32647:358913589136178288Synechocystis sp. PCC 6803 plasmid pSYSA, complete sequencehypothetical protein1e-23108
NC_014228:2883500:288483428848342885118285Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein7e-22102
NC_013892:1272448:127244812724481272732285Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-21100
NC_013416:939668:942588942588942884297Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative transcriptional regulator5e-2096.3
NC_008344:1899317:192287719228771923164288Nitrosomonas eutropha C91, complete genomeputative transcriptional regulator2e-1891.3
NC_014722:1191380:119545311954531195749297Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein2e-1890.9
NC_012857:557911:577119577119577577459Ralstonia pickettii 12D chromosome 2, complete genome3e-1787.4
NC_012751:1988280:200291420029142003213300Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeaddiction module4e-1786.7
NC_016043:471719:487663487663487956294Taylorella asinigenitalis MCE3 chromosome, complete genomeputative antitoxin4e-1683.6
NC_020829:5620826:562475656247565625049294Pseudomonas denitrificans ATCC 13867, complete genomeputative transcriptional regulator6e-1682.8
NC_010338:1216385:122227512222751223102828Caulobacter sp. K31, complete genomeputative transcriptional regulator8e-1682.4
NC_014246:1402500:143472214347221435015294Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcription regulator1e-1582
NC_009655:1357486:136691113669111367201291Actinobacillus succinogenes 130Z chromosome, complete genomeputative transcriptional regulator2e-1580.9
NC_006513:3486558:349299634929963493298303Azoarcus sp. EbN1, complete genomeconserved hypothetical protein, putative regulator7e-1579.3
NC_010678:114000:133388133388133783396Ralstonia pickettii 12J chromosome 2, complete sequenceputative transcriptional regulator3e-1477
NC_010939:1986263:202145920214592021767309Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein5e-1476.3
NC_010278:1918000:194414319441431944451309Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,transcriptional regulator5e-1476.3
NC_008751:1736512:174539317453931745686294Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative transcriptional regulator8e-1475.9
NC_016830:2247789:226220822622082262516309Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein9e-1475.5
NC_011761:1499500:150040015004001500696297Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein1e-1375.1
NC_011206:1379068:137961713796171379913297Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative transcriptional regulator1e-1375.1
NC_011146:3089297:310050831005083100810303Geobacter bemidjiensis Bem, complete genome2e-1374.7
NC_008740:2989856:299684629968462997169324Marinobacter aquaeolei VT8, complete genomeputative transcriptional regulator8e-1372.4
NC_014644:1:216482164822004357Gardnerella vaginalis ATCC 14019 chromosome, complete genomeputative transcriptional regulator2e-1271.2
NC_014365:2888897:289710528971052897440336Desulfarculus baarsii DSM 2075 chromosome, complete genomeputative addiction module antidote protein3e-1270.5
NC_011206:262844:265276265276265572297Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative transcriptional regulator6e-1269.7
NC_007275:1:387338734169297Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, Cro/CI family6e-1269.7
NC_017267:2698944:271560627156062715911306Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeputative addiction module antidote protein6e-1269.3
NC_009337:715500:761974761974762267294Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeputative transcriptional regulator1e-1168.6
NC_014323:4792048:483557948355794836058480Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein2e-1167.8
NC_009802:931129:937689937689937967279Campylobacter concisus 13826, complete genomeprobable addiction module antidote protein4e-1167
NC_017033:1052000:107177210717721072077306Frateuria aurantia DSM 6220 chromosome, complete genomeputative addiction module antidote protein3e-1063.9
NC_008751:1762562:178264317826431782906264Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative transcriptional regulator5e-1063.2
NC_013959:2801557:281505728150572815389333Sideroxydans lithotrophicus ES-1 chromosome, complete genomeaddiction module antidote protein6e-1063.2
NC_014722:846084:895989895989896189201Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein2e-0961.6
NC_011894:5787990:581674658167465816976231Methylobacterium nodulans ORS 2060, complete genome2e-0961.2
NC_008609:2840249:285128028512802851732453Pelobacter propionicus DSM 2379, complete genomeputative transcriptional regulator2e-0960.8
NC_017986:4124335:414123941412394141589351Pseudomonas putida ND6 chromosome, complete genomeputative transcriptional regulator3e-0960.5
NC_015713:1594114:161339816133981613691294Simkania negevensis Z chromosome gsn.131, complete genomehypothetical protein5e-0856.6
NC_004578:6089958:610795261079526108296345Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-0754.7
NC_004088:3382148:339943433994343399754321Yersinia pestis KIM, complete genomehypothetical protein2e-0754.7
NC_005810:1130251:114753811475381147858321Yersinia pestis biovar Microtus str. 91001, complete genomeputative DNA-binding prophage protein2e-0754.7
NC_003143:1233128:123507112350711235391321Yersinia pestis CO92, complete genomeputative DNA-binding prophage protein2e-0754.7
NC_017265:1136000:113640111364011136721321Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative DNA-binding prophage protein2e-0754.7
NC_008150:650899:651813651813652127315Yersinia pestis Antiqua, complete genomeputative DNA-binding prophage protein2e-0754.7
NC_008149:3251196:326848332684833268797315Yersinia pestis Nepal516, complete genomeDNA-binding prophage protein2e-0754.7
NC_009381:2939782:295706829570682957382315Yersinia pestis Pestoides F chromosome, complete genomeDNA-binding prophage protein2e-0754.7
NC_014029:1283500:128427412842741284588315Yersinia pestis Z176003 chromosome, complete genomeDNA-binding prophage protein2e-0754.7
NC_017160:1507500:152493015249301525244315Yersinia pestis D182038 chromosome, complete genomeDNA-binding prophage protein2e-0754.7
NC_017168:4155143:415709341570934157407315Yersinia pestis A1122 chromosome, complete genomeputative DNA-binding prophage protein2e-0754.7
NC_012962:1827000:184627318462731846575303Photorhabdus asymbiotica, complete genomehypothetical protein3e-0650.4
NC_005126:1223042:124160412416041241915312Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein5e-0650.1