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Query: NC_005126:2262500:2281063 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 2281063, End: 2281722, Length: 660

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012962:3030726:303249230324923033151660Photorhabdus asymbiotica, complete genomeflagella basal body p-ring formation protein flga1e-105382
NC_014500:3071764:307345430734543074140687Dickeya dadantii 3937 chromosome, complete genomeflagellar basal-body P-ring formation protein flgA4e-42171
NC_010634:2004653:202809520280952028874780Yersinia pseudotuberculosis PB1/+, complete genomeflagella basal body P-ring formation protein FlgA5e-40164
NC_013508:1289159:133213913321391332888750Edwardsiella tarda EIB202, complete genomeflagellar basal body P-ring biosynthesis protein7e-40163
NC_012880:1765920:180764018076401808344705Dickeya dadantii Ech703, complete genomeflagella basal body P-ring formation protein FlgA1e-32139
NC_004344:26828:447814478145458678Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein4e-2098.2
NC_007963:2232000:223384122338412234596756Chromohalobacter salexigens DSM 3043, complete genomeFlageller protein FlgA3e-1789
NC_007298:778723:819345819345820022678Dechloromonas aromatica RCB, complete genomeflagellar basal body P-ring biosynthesis protein4e-1788.2
NC_014910:4026613:404936040493604050106747Alicycliphilus denitrificans BC chromosome, complete genomeflagella basal body p-ring formation protein flga1e-1583.2
NC_015422:4395388:441762944176294418375747Alicycliphilus denitrificans K601 chromosome, complete genomeflagella basal body P-ring formation protein FlgA2e-1582.8
NC_016893:43234:459524595246632681Wigglesworthia glossinidia endosymbiont of Glossina morsitansFlgA family flagellar basal-body P-ring formation protein1e-1272.8
NC_007484:3035068:303986530398653040572708Nitrosococcus oceani ATCC 19707, complete genomeFlageller protein FlgA8e-0857.4
NC_015437:2164997:216678221667822167516735Selenomonas sputigena ATCC 35185 chromosome, complete genomeflagella basal body P-ring formation protein FlgA4e-0754.7
NC_007759:1356439:137150613715061372240735Syntrophus aciditrophicus SB, complete genomeflagellar basal body P-ring biosynthesis protein4e-0651.6
NC_009831:66518:799587995880704747Shewanella sediminis HAW-EB3, complete genomeSAF domain4e-0651.6