Pre_GI: BLASTP Hits

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Query: NC_005126:1315474:1320126 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1320126, End: 1321181, Length: 1056

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005126:589000:60477060477061853013761Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein0693
NC_005126:1265071:130074113007411301553813Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein7e-80297
NC_012912:1701231:172575417257541726470717Dickeya zeae Ech1591, complete genome9e-39161
NC_012846:986877:99215899215810006688511Bartonella grahamii as4aup, complete genomefilamentous hemagglutinin1e-32140
NC_010161:432000:446073446073446747675Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-30133
NC_010161:432000:4369284369284444697542Bartonella tribocorum CIP 105476, complete genomefilamentous hemagglutinin3e-23109
NC_010161:1368500:1373393137339313809707578Bartonella tribocorum CIP 105476, complete genomefilamentous hemagglutinin2e-22107
NC_013421:4714478:472762347276234728036414Pectobacterium wasabiae WPP163, complete genome6e-22105
NC_012846:1708840:1713608171360817220408433Bartonella grahamii as4aup, complete genomefilamentous hemagglutinin3e-21102
NC_010161:432000:4492884492884505261239Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-20100
NC_012846:1778443:1783724178372417921568433Bartonella grahamii as4aup, complete genomefilamentous hemagglutinin4e-1995.9
NC_019842:2134803:2147142214714221489471806Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,phage DNA manipulating enzyme4e-1582.8
UCMB5137:2054735:207281220728122073516705Bacillus atrophaeus UCMB-5137putative phage DNA manipulating enzyme7e-1581.6
NC_017355:997089:101842010184201019406987Helicobacter pylori v225d chromosome, complete genomehypothetical protein1e-1480.9
NC_020209:3874844:389148438914843892071588Pseudomonas poae RE*1-1-14, complete genomehypothetical protein2e-1480.1
NC_017068:870000:8817918817918888107020Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-1274.7
NC_019842:484933:4962994962994980951797Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-1272.8
NC_012673:1046016:105502410550241055560537Exiguobacterium sp. AT1b, complete genomehypothetical protein4e-1272.4
NC_015381:1588742:161927216192721619871600Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein7e-1271.6
NC_005126:349658:365858365858366232375Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-1171.2
NC_019896:1483073:1535949153594915377151767Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeTopI - like protein YobL1e-1068.2
NC_019896:1989997:1990655199065519924571803Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeTopI - like protein YobL3e-1066.2
NC_020244:2049753:2064109206410920658331725Bacillus subtilis XF-1, complete genomeputative phage DNA manipulating enzyme4e-1066.2
NC_015144:1284453:129331212933121293878567Weeksella virosa DSM 16922 chromosome, complete genome1e-0964.7
NC_020410:2068500:2081906208190620837351830Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completephage toxin ribonuclease2e-0963.5
NC_020410:1781884:1790207179020717913221116Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete1e-0861.2
NC_014551:1872000:1883257188325718850561800Bacillus amyloliquefaciens DSM 7, complete genomephage DNA manipulating enzyme3e-0859.7