Pre_GI: BLASTP Hits

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Query: NC_005126:1223042:1250272 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 1250272, End: 1251342, Length: 1071

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014228:2270000:2297557229755722986241068Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein6e-170597
NC_010170:4196197:4212350421235042134741125Bordetella petrii, complete genomehypothetical protein1e-109396
NC_009523:341347:3462563462563472991044Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein4e-91335
NC_010981:1371265:1383152138315213841831032Wolbachia pipientis, complete genomephage uncharacterized protein1e-90333
NC_014393:4612301:4635899463589946369121014Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein1e-90333
NC_012416:753500:7771587771587782161059Wolbachia sp. wRi, complete genomephage uncharacterized protein1e-89330
NC_016025:596670:5966705966705977251056Candidatus Chloracidobacterium thermophilum B chromosome chromosomehypothetical protein5e-88324
NC_004578:1190000:1194524119452411955761053Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein9e-87320
NC_008255:3331613:3361946336194633630911146Cytophaga hutchinsonii ATCC 33406, complete genomehypothetical protein2e-84312
NC_015577:786155:8014268014268024601035Treponema azotonutricium ZAS-9 chromosome, complete genomehypothetical protein7e-82304
NC_008786:1936626:1949520194952019505841065Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF10165e-82304
NC_017271:1289278:1297992129799212990471056Xanthomonas campestris pv. raphani 756C chromosome, completehypothetical protein2e-80299
NC_009930:152500:1701311701311711771047Acaryochloris marina MBIC11017 plasmid pREB5, complete sequencehypothetical protein1e-78293
NC_013235:1218378:1226710122671012278161107Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF10166e-78291
NC_015977:2874000:2885157288515728862151059Roseburia hominis A2-183 chromosome, complete genomehypothetical protein7e-74277
NC_014973:3452100:3486721348672134877641044Geobacter sp. M18 chromosome, complete genomehypothetical protein8e-69261
NC_014550:3316115:3339816333981633408591044Arthrobacter arilaitensis Re117, complete genomehypothetical protein1e-65250
NC_016629:3789554:3805354380535438063881035Desulfovibrio africanus str. Walvis Bay chromosome, completehypothetical protein2e-65249
NC_019968:1304450:1325487132548713267701284Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein8e-65247
NC_008786:1298817:1312871131287113139351065Verminephrobacter eiseniae EF01-2, complete genomeprotein of unknown function DUF10161e-64246
NC_015571:2002489:2027231202723120284991269Porphyromonas gingivalis TDC60, complete genomehypothetical protein3e-64245
NC_015311:813989:8206338206338219101278Prevotella denticola F0289 chromosome, complete genomehypothetical protein3e-62239
NC_008713:259791:2775932775932786421050Arthrobacter aurescens TC1 plasmid TC2, complete sequenceProtein of unknown function (DUF1016)2e-59230
NC_013730:4118355:4130993413099341320781086Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF10164e-57222
NC_013410:1651000:1656440165644016575131074Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein3e-56219
NC_006087:2292791:230723323072332308111879Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein8e-43174
NC_015578:1038588:104684410468441047842999Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein2e-42173
NC_009052:4335754:4347122434712243482041083Shewanella baltica OS155, complete genomeprotein of unknown function DUF10166e-41168
NC_008713:259791:282357282357283154798Arthrobacter aurescens TC1 plasmid TC2, complete sequenceProtein of unknown function (DUF1016)1e-40167
NC_009089:2150062:2153747215374721547931047Clostridium difficile 630, complete genomeputative conjugative transposon conserved hypothetical protein2e-39163
NC_009664:4423829:4435284443528444364651182Kineococcus radiotolerans SRS30216, complete genomeprotein of unknown function DUF10162e-39163
NC_015510:2907815:2913133291313329142421110Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein1e-39163
NC_019977:1806500:182005518200551820450396Methanomethylovorans hollandica DSM 15978, complete genome3e-38159
NC_009051:1242351:1249747124974712508111065Methanoculleus marisnigri JR1, complete genomeprotein of unknown function DUF10165e-37155
NC_005773:694990:7131137131137141291017Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein2e-36153
NC_011832:1535740:154519415451941545784591Candidatus Methanosphaerula palustris E1-9c, complete genome2e-35150
NC_003295:2787371:2823536282353628246031068Ralstonia solanacearum GMI1000, complete genomehypothetical protein1e-35150
NC_003901:3591500:3599624359962436007151092Methanosarcina mazei Go1, complete genomehypothetical protein1e-34147
NC_015731:1:1018210182112371056Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein2e-34146
NC_013132:3081806:309126830912683091638371Chitinophaga pinensis DSM 2588, complete genome2e-33143
NC_010002:3002354:3014164301416430153001137Delftia acidovorans SPH-1, complete genomeprotein of unknown function DUF10164e-33142
NC_014623:2962330:2964055296405529651971143Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-33142
NC_006526:1976779:1985478198547819866441167Zymomonas mobilis subsp. mobilis ZM4, complete genomehypothetical protein1e-32140
NC_015977:255029:2635162635162645891074Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-32140
NC_003454:2113464:2117493211749321185181026Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHypothetical cytosolic protein4e-31135
NC_015222:3137167:314349831434983144493996Nitrosomonas sp. AL212 chromosome, complete genomehypothetical protein1e-30134
NC_014933:2240000:2254840225484022558921053Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein2e-29130
NC_008752:725189:7320527320527330771026Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF10161e-29130
NC_017068:1143515:1185792118579211868051014Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein3e-29129
NC_016510:1749967:1770957177095717719581002Flavobacterium columnare ATCC 49512 chromosome, complete genomeputative nuclease3e-29129
NC_018691:3041851:3049304304930430505361233Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein5e-29128
NC_015383:368500:3750443750443761981155Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequencehypothetical protein2e-28127
NC_016610:2077603:2093492209349220946521161Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein1e-27124
NC_008781:1038158:1043932104393210450111080Polaromonas naphthalenivorans CJ2, complete genomeprotein of unknown function DUF10162e-27123
NC_018876:2151226:2163308216330821643841077Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein2e-27123
NC_009053:1668500:1673509167350916745251017Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein4e-27122
NC_013730:5914142:5920847592084759218901044Spirosoma linguale DSM 74, complete genomeprotein of unknown function DUF10161e-25117
NC_009925:2240871:2240871224087122419981128Acaryochloris marina MBIC11017, complete genomehypothetical protein1e-25117
NC_011001:302500:3247613247613258191059Burkholderia cenocepacia J2315 chromosome 2, complete sequence4e-24112
NC_009664:4377777:438696343869634387562600Kineococcus radiotolerans SRS30216, complete genomeprotein of unknown function DUF10164e-23109
NC_010278:1625695:163077916307791631699921Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein2e-22106
NC_010939:1633000:163580916358091636729921Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein7e-22105
NC_010801:238430:2468122468122478971086Burkholderia multivorans ATCC 17616 chromosome 3, completehypothetical protein5e-22105
NC_016915:346000:368033368033368320288Rickettsia rickettsii str. Hlp#2 chromosome, complete genomehypothetical protein4e-22105
NC_010084:2484000:252605325260532526790738Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein3e-22105
NC_010804:996837:997983997983998693711Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein9e-21101
NC_012416:205925:2074192074192084421024Wolbachia sp. wRi, complete genome1e-20100
NC_014718:791528:792891792891793760870Burkholderia rhizoxinica HKI 454 chromosome, complete genomeHypothetical cytosolic protein6e-1995.1
NC_016112:364723:369663369663370082420Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein1e-1894.4
NC_016776:5174606:5219168521916852202981131Bacteroides fragilis 638R, complete genomehypothetical protein4e-1892.8
NC_009441:3562125:3572760357276035738961137Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein2e-1686.7
NC_009615:3993187:400344940034494004351903Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein9e-1684.7
NC_011886:1176238:120540012054001205936537Arthrobacter chlorophenolicus A6, complete genomeprotein of unknown function DUF10161e-1274.7
NC_014033:3462437:3478370347837034795781209Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-1066.2
NC_017044:702483:729980729980730276297Rickettsia parkeri str. Portsmouth chromosome, complete genomehypothetical protein3e-0963.2
NC_016112:364723:369066369066369659594Methylomicrobium alcaliphilum chromosome, complete genomehypothetical protein5e-0962.4
NC_011830:2623346:264170026417002642605906Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function DUF10162e-0757
NC_010981:1371265:137665613766561377126471Wolbachia pipientis, complete genomehypothetical protein4e-0756.2
NC_009664:4377777:438653343865334386895363Kineococcus radiotolerans SRS30216, complete genomehypothetical protein7e-0755.1
NC_013235:3129384:313171631317163131997282Nakamurella multipartita DSM 44233, complete genome8e-0755.1
NC_014033:896120:909000909000909443444Prevotella ruminicola 23 chromosome, complete genomehypothetical protein4e-0652.8