Pre_GI: BLASTP Hits

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Query: NC_004917:946550:950049 Helicobacter hepaticus ATCC 51449, complete genome

Start: 950049, End: 950747, Length: 699

Host Lineage: Helicobacter hepaticus; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This organism was found to be linked to an increasing incidence of liver tumors in mouse colonies at the National Cancer Institute in 1992. Normally it resides in the lower intestines, but it can cause chronic hepatitis. This organism has a similar urease gene cluster and cytolethal distending toxin as compared to Helicobacter pylori, but lacks other virulence factors such as the vacuolating cytotoxin and the cag pathogenicity island. However, it does contain a pathogenicity island that encodes proteins similar to those found in a type IV secretion system. Causes liver disease. This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). This species was associated with an increase in liver tumors. It can cause active chronic hepatitis and typhlitis (inflammation of a region at the beginning of the large intestine), hepatocellular tumors, and gastric bowel disease in various mice strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009715:1470419:150059415005941501094501Campylobacter curvus 525.92 chromosome, complete genomeputative lipoprotein1e-26120
NC_017068:2661419:267797626779762678851876Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein6e-1477.8
NC_014355:1865003:1939531193953119405381008Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0963.2
NC_009654:4253431:426294242629424263571630Marinomonas sp. MWYL1, complete genomehypothetical protein7e-0857.4
NC_011138:3182807:318328531832853183770486Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein8e-0857.4
NC_009438:3019552:302256630225663023015450Shewanella putrefaciens CN-32 chromosome, complete genomehypothetical protein2e-0652.8
NC_014541:2978500:298216929821692982615447Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF4003e-0652.4
NC_009092:1504363:155028915502891550735447Shewanella loihica PV-4, complete genomeprotein of unknown function DUF4006e-0651.2
NC_009997:3661083:367154336715433671992450Shewanella baltica OS195, complete genomeprotein of unknown function DUF4007e-0650.8