Pre_GI: BLASTP Hits

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Query: NC_004917:340997:342657 Helicobacter hepaticus ATCC 51449, complete genome

Start: 342657, End: 343037, Length: 381

Host Lineage: Helicobacter hepaticus; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This organism was found to be linked to an increasing incidence of liver tumors in mouse colonies at the National Cancer Institute in 1992. Normally it resides in the lower intestines, but it can cause chronic hepatitis. This organism has a similar urease gene cluster and cytolethal distending toxin as compared to Helicobacter pylori, but lacks other virulence factors such as the vacuolating cytotoxin and the cag pathogenicity island. However, it does contain a pathogenicity island that encodes proteins similar to those found in a type IV secretion system. Causes liver disease. This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). This species was associated with an increase in liver tumors. It can cause active chronic hepatitis and typhlitis (inflammation of a region at the beginning of the large intestine), hepatocellular tumors, and gastric bowel disease in various mice strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009715:399159:401369401369401749381Campylobacter curvus 525.92 chromosome, complete genomeTonB system transport protein ExbD3e-37153
NC_012039:412837:444033444033444422390Campylobacter lari RM2100, complete genomeTonB system transport protein ExbD7e-33139
NC_016513:810259:821617821617822063447Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeTonB system transport protein ExbD2e-2097.8
NC_017192:2153461:217150421715042171884381Arcobacter sp. L, complete genomebiopolymer transport protein4e-2096.7
NC_009663:1656804:167496116749611675338378Sulfurovum sp. NBC37-1, complete genomebiopolymer ExbD/TolR family transporter4e-1580.1
NC_010634:3905369:392659939265993927030432Yersinia pseudotuberculosis PB1/+, complete genomeTonB system transport protein ExbD1e-1478.6
NC_006155:3992818:401514240151424015567426Yersinia pseudotuberculosis IP 32953, complete genomeExbD/TolR-family transport protein1e-1478.6
NC_008800:3955284:397258139725813973006426Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,biopolymer transport protein ExbD2e-1477.8
NC_008150:3430000:344724334472433447668426Yersinia pestis Antiqua, complete genomeExbD/TolR-family transport protein4e-1476.6
NC_008149:650706:655283655283655708426Yersinia pestis Nepal516, complete genomeExbD/TolR-family transport protein4e-1476.6
NC_009381:522731:527308527308527733426Yersinia pestis Pestoides F chromosome, complete genomebiopolymer transport protein ExbD4e-1476.6
NC_010465:733916:737503737503737934432Yersinia pseudotuberculosis YPIII, complete genomeTonB system transport protein ExbD4e-1476.6
NC_004088:3859173:387636138763613876792432Yersinia pestis KIM, complete genomeTonB-complex protein4e-1476.6
NC_003143:741169:745740745740746171432Yersinia pestis CO92, complete genomeExbD/TolR-family transport protein4e-1476.6
NC_010159:259695:276883276883277314432Yersinia pestis Angola, complete genometonB system transport protein ExbD4e-1476.6
NC_005810:3333000:333768233376823338113432Yersinia pestis biovar Microtus str. 91001, complete genomebiopolymer transport protein ExbD4e-1476.6
NC_009708:692508:697133697133697564432Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebiopolymer transport protein ExbD4e-1476.6
NC_014029:792719:797284797284797715432Yersinia pestis Z176003 chromosome, complete genomeExbD/TolR-family transport protein4e-1476.6
NC_017154:734875:739446739446739877432Yersinia pestis D106004 chromosome, complete genomeExbD/TolR-family transport protein4e-1476.6
NC_017160:737000:741625741625742056432Yersinia pestis D182038 chromosome, complete genomeExbD/TolR-family transport protein4e-1476.6
NC_017168:341233:359131359131359562432Yersinia pestis A1122 chromosome, complete genomebiopolymer transport protein ExbD4e-1476.6
NC_017265:3724500:374172137417213742152432Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,membrane spanning protein in TonB-ExbB-ExbD complex4e-1476.6
NC_015224:3820338:385084438508443851269426Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,biopolymer transport protein ExbD3e-1373.6
NC_010794:2157920:217854721785472178966420Methylacidiphilum infernorum V4, complete genomeBiopolymer transport protein2e-1270.9
NC_007613:2981829:300178030017803002205426Shigella boydii Sb227, complete genomeExbD1e-1168.6
NC_012440:373863:380844380844381248405Persephonella marina EX-H1, complete genomebiopolymer transport protein ExbD6e-1166.2
NC_010577:1:121561215612566411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR6e-0959.3
NC_014315:114151:138951138951139397447Nitrosococcus watsoni C-113 chromosome, complete genomeprotein TolR7e-0959.3
NC_008340:277223:278226278226278675450Alkalilimnicola ehrlichei MLHE-1, complete genomeBiopolymer transport protein ExbD/TolR1e-0858.5
NC_010943:9294:122121221212637426Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD1 protein2e-0857.8
NC_005773:208000:230750230750231175426Pseudomonas syringae pv. phaseolicola 1448A, complete genomeTonB system transport protein ExbD13e-0857
NC_004757:230541:250127250127250543417Nitrosomonas europaea ATCC 19718, complete genomeBiopolymer transport protein ExbD/TolR6e-0856.2
NC_015851:181721:185957185957186355399Acidithiobacillus caldus SM-1 megaplasmid, complete sequencebiopolymer transport protein ExbD/TolR8e-0855.8
NC_004556:1:122651226512684420Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD1 protein8e-0855.8
NC_002488:1:122851228512707423Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD1 protein8e-0855.8
NC_017100:2414075:242512724251272425576450Acetobacter pasteurianus IFO 3283-03, complete genomeExbD/TolR1e-0755.1
NC_011071:10842:124281242812853426Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR1e-0755.1
NC_013209:2414500:242392024239202424369450Acetobacter pasteurianus IFO 3283-01, complete genomeExbD/TolR1e-0755.1
NC_003902:2469500:250536925053692505806438Xanthomonas campestris pv. campestris str. ATCC 33913, completebiopolymer transport protein1e-0755.1
NC_017108:2413000:242246424224642422913450Acetobacter pasteurianus IFO 3283-12, complete genomeExbD/TolR1e-0755.1
NC_017111:2413000:242248224224822422931450Acetobacter pasteurianus IFO 3283-32, complete genomeExbD/TolR1e-0755.1
NC_017121:2413000:242246924224692422918450Acetobacter pasteurianus IFO 3283-07, complete genomeExbD/TolR1e-0755.1
NC_017125:2415500:242510724251072425556450Acetobacter pasteurianus IFO 3283-22, complete genomeExbD/TolR1e-0755.1
NC_017146:2416000:242514924251492425598450Acetobacter pasteurianus IFO 3283-26, complete genomeExbD/TolR1e-0755.1
NC_011296:909558:929488929488929892405Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTolR protein1e-0755.5
NC_016147:1788219:178821917882191788698480Pseudoxanthomonas spadix BD-a59 chromosome, complete genomebiopolymer transport protein2e-0754.3
NC_003919:2435058:243459724345972435061465Xanthomonas axonopodis pv. citri str. 306, complete genomebiopolymer transport protein2e-0754.7
NC_002977:2407392:242890124289012429305405Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family4e-0753.5
NC_004578:4465247:448182944818294482293465Pseudomonas syringae pv. tomato str. DC3000, complete genometolR protein7e-0752.8
NC_009850:1601982:160470116047011605090390Arcobacter butzleri RM4018, complete genomebiopolymer transport protein ExbD4e-0650.1
NC_017187:1511567:152020815202081520597390Arcobacter butzleri ED-1, complete genomebiopolymer transport protein ExbD4e-0650.1
NC_017192:2114433:212032021203202120709390Arcobacter sp. L, complete genomebiopolymer transport protein ExbD4e-0650.1
NC_008781:3056407:307737830773783077812435Polaromonas naphthalenivorans CJ2, complete genomeBiopolymer transport protein ExbD/TolR5e-0650.1
NC_018080:4465618:448459944845994485039441Pseudomonas aeruginosa DK2 chromosome, complete genomeTolR protein5e-0650.1
NC_008463:4566976:459652945965294596969441Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolR protein5e-0650.1
NC_011770:4763506:478338547833854783825441Pseudomonas aeruginosa LESB58, complete genomeTolR protein5e-0650.1
NC_002516:1031386:105456610545661055006441Pseudomonas aeruginosa PAO1, complete genomeTolR protein5e-0650.1
NC_015726:2817352:283644228364422836885444Cupriavidus necator N-1 chromosome 1, complete sequencebiopolymer transport protein ExbD8e-0649.3