Pre_GI: BLASTP Hits

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Query: NC_004917:241053:243237 Helicobacter hepaticus ATCC 51449, complete genome

Start: 243237, End: 246791, Length: 3555

Host Lineage: Helicobacter hepaticus; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This organism was found to be linked to an increasing incidence of liver tumors in mouse colonies at the National Cancer Institute in 1992. Normally it resides in the lower intestines, but it can cause chronic hepatitis. This organism has a similar urease gene cluster and cytolethal distending toxin as compared to Helicobacter pylori, but lacks other virulence factors such as the vacuolating cytotoxin and the cag pathogenicity island. However, it does contain a pathogenicity island that encodes proteins similar to those found in a type IV secretion system. Causes liver disease. This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). This species was associated with an increase in liver tumors. It can cause active chronic hepatitis and typhlitis (inflammation of a region at the beginning of the large intestine), hepatocellular tumors, and gastric bowel disease in various mice strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009802:114749:1427701427701462583489Campylobacter concisus 13826, complete genome0793
NC_012913:1832500:1849033184903318525303498Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein IcmF7e-40166
NC_018868:973379:9733799733799769153537Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein3e-39164
NC_008740:4109000:4125749412574941293333585Marinobacter aquaeolei VT8, complete genometranscriptional regulator, Fis family6e-39163
NC_008570:2014151:2014151201415120176363486Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImcF family protein1e-38162
NC_004605:1092476:1095070109507010985883519Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein1e-38162
NC_007645:4423507:4440744444074444442023459Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-38162
NC_004578:6138669:6157343615734361609213579Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-36154
NC_014228:4331327:4338297433829743419023606Xenorhabdus nematophila ATCC 19061, complete genomeConserved hypothetical protein (probable component of SST VI cluster)3e-34148
NC_005126:349658:3568883568883604333546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-33144
NC_013892:274297:2849322849322885013570Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-32142
NC_005126:349658:3824313824313859763546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-32140
NC_006155:4302826:4315540431554043190733534Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-31137
NC_013421:1173051:1173051117305111765483498Pectobacterium wasabiae WPP163, complete genometype VI secretion protein IcmF5e-31137
NC_010634:4234932:4246637424663742501703534Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein IcmF5e-31137
NC_010465:429095:4346014346014381343534Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein IcmF5e-31137
NC_009708:372422:3779283779283814613534Yersinia pseudotuberculosis IP 31758 chromosome, complete genomelipoprotein5e-31137
NC_003143:4006884:4012390401239040159233534Yersinia pestis CO92, complete genomehypothetical protein4e-31137
NC_009381:222735:2282322282322317653534Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-31137
NC_014029:3958811:3964317396431739678503534Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-31137
NC_017154:3898925:3904431390443139079643534Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-31137
NC_017168:1631052:1636558163655816400913534Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-31137
NC_017265:4265659:4278317427831742818503534Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-31137
NC_014306:679888:6798886798886835083621Erwinia billingiae Eb661, complete genomeType VI secretion system, IcmF5e-30134
NC_012962:293976:3021943021943057393546Photorhabdus asymbiotica, complete genomehypothetical protein1e-29132
NC_016816:1823127:1823127182312718267533627Pantoea ananatis LMG 5342, complete genometype VI secretion protein IcmF1e-29132
NC_020064:2921809:2921809292180929254533645Serratia marcescens FGI94, complete genometype VI secretion protein IcmF1e-26123
NC_018000:2964500:2989499298949929930293531Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein8e-27123
NC_015968:4117835:4135929413592941395883660Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein IcmF7e-26120
NC_011740:1991941:2010341201034120138623522Escherichia fergusonii ATCC 35469, complete genomeIcmF-like protein6e-24114
NC_007511:2072838:2078291207829120822893999Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein7e-24113
NC_008313:691692:7102487102487140693822Ralstonia eutropha H16 chromosome 1, complete sequenceprotein of unknown function, ImcF-related3e-23111
NC_011149:1077589:1095358109535810988193462Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion protein IcmF8e-23110
NC_011988:1036618:1056348105634810598423495Agrobacterium vitis S4 chromosome 2, complete genomeIcmF family protein1e-21106
NC_017192:2216914:2230436223043622338013366Arcobacter sp. L, complete genomehypothetical protein1e-21106
NC_014323:816027:8334198334198372943876Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein2e-21105
NC_020829:809457:8248258248258283613537Pseudomonas denitrificans ATCC 13867, complete genometype VI secretion protein IcmF3e-21104
NC_014355:1865003:1882727188272718863563630Candidatus Nitrospira defluvii, complete genomehypothetical protein4e-21104
NC_014323:4619344:4619344461934446231443801Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein4e-21104
NC_008391:271254:2874242874242915214098Burkholderia cepacia AMMD chromosome 2, complete sequenceImcF domain protein6e-21103
NC_014310:811977:8415608415608454893930Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein7e-21103
NC_009439:101174:1011741011741047133540Pseudomonas mendocina ymp, complete genomeImcF domain-containing protein1e-20102
NC_003296:941920:9611259611259650663942Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN3e-20101
NC_007005:5882205:5887089588708958895812493Pseudomonas syringae pv. syringae B728a, complete genomeOmpA/MotB7e-20100
NC_005773:106000:1406801406801431722493Pseudomonas syringae pv. phaseolicola 1448A, complete genomeOmpA domain protein9e-20100
NC_013282:1256769:1280666128066612844513786Cronobacter turicensis, complete genomehypothetical protein4e-1997.8
NC_007510:409843:4438784438784478253948Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein3e-1895.1
NC_010084:3173757:3173757317375731777043948Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein IcmF2e-1792.4
NC_014931:6031645:6031645603164560354903846Variovorax paradoxus EPS chromosome, complete genometype VI secretion protein IcmF2e-1792
NC_007511:1094050:1110148111014811142574110Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein7e-1687.4
NC_014733:1223359:1241633124163312437472115Methylovorus sp. MP688 chromosome, complete genometype VI secretion protein icmf8e-1583.6
NC_010805:2432167:2435836243583624397893954Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein3e-1481.6
NC_010086:20876:3551535515394683954Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion protein IcmF3e-1481.6
NC_010805:1576735:1580085158008515841854101Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein3e-1378.6
NC_010086:871723:8911198911198952194101Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion protein IcmF3e-1378.6
NC_016831:1905289:1905289190528919087503462Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-1276.6
NC_011274:1094379:1116332111633211198533522Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1276.6
NC_016902:3863932:3866111386611138696353525Escherichia coli KO11FL chromosome, complete genometype VI secretion protein IcmF1e-1276.6
CP002185:234719:2422682422682457923525Escherichia coli W, complete genomeIcmF-like protein1e-1276.6
CP002516:3863932:3866111386611138696353525Escherichia coli KO11, complete genometype VI secretion protein IcmF1e-1276.6
NC_011205:1186097:1208040120804012115013462Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-1276.6
NC_010804:324396:3496073496073510161410Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-1275.1
NC_005773:106000:1441241441241480443921Pseudomonas syringae pv. phaseolicola 1448A, complete genomeImcF-related family1e-1069.7
NC_007005:5882205:5882205588220558861373933Pseudomonas syringae pv. syringae B728a, complete genomeImcF-related:Protein of unknown function DUF12152e-1068.9
NC_014837:3766426:3791881379188137952373357Pantoea sp. At-9b chromosome, complete genomeImcF domain-containing protein2e-0965.9
NC_017265:2586729:2586729258672925901513423Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-0758.2
NC_017168:3977767:3977767397776739811893423Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-0758.2
NC_009381:1682000:1683661168366116870833423Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-0758.2
NC_008149:2802392:2802392280239228058143423Yersinia pestis Nepal516, complete genomemembrane protein4e-0758.2
NC_004088:2966331:2966331296633129697533423Yersinia pestis KIM, complete genomehypothetical protein4e-0758.2
NC_010465:2820500:2847223284722328506453423Yersinia pseudotuberculosis YPIII, complete genomeImcF domain protein4e-0758.2