Pre_GI: BLASTP Hits

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Query: NC_004917:241053:242444 Helicobacter hepaticus ATCC 51449, complete genome

Start: 242444, End: 243232, Length: 789

Host Lineage: Helicobacter hepaticus; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This organism was found to be linked to an increasing incidence of liver tumors in mouse colonies at the National Cancer Institute in 1992. Normally it resides in the lower intestines, but it can cause chronic hepatitis. This organism has a similar urease gene cluster and cytolethal distending toxin as compared to Helicobacter pylori, but lacks other virulence factors such as the vacuolating cytotoxin and the cag pathogenicity island. However, it does contain a pathogenicity island that encodes proteins similar to those found in a type IV secretion system. Causes liver disease. This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). This species was associated with an increase in liver tumors. It can cause active chronic hepatitis and typhlitis (inflammation of a region at the beginning of the large intestine), hepatocellular tumors, and gastric bowel disease in various mice strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009802:114749:135621135621136385765Campylobacter concisus 13826, complete genomeaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B)8e-37154
NC_012913:1832500:184591218459121846769858Aggregatibacter aphrophilus NJ8700, complete genomeVasF2e-1893.2
NC_013421:1143500:116609911660991166875777Pectobacterium wasabiae WPP163, complete genometype IV / VI secretion system protein, DotU family4e-1892
NC_013592:1424560:144682414468241447600777Dickeya dadantii Ech586, complete genometype IV / VI secretion system protein, DotU family5e-1891.7
NC_008570:1986466:200714520071452007855711Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-1789.7
NC_015968:4117835:414576341457634146551789Enterobacter asburiae LF7a chromosome, complete genomeDotU family type IV / VI secretion system protein3e-1582.4
NC_004603:1519904:152121115212111522017807Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein3e-1479
NC_005126:349658:391509391509392279771Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-1375.5
NC_013892:274297:278546278546279313768Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein2e-1273.6
NC_012962:293976:311260311260312030771Photorhabdus asymbiotica, complete genomehypothetical protein2e-1273.2
NC_007645:4423507:444428844442884445169882Hahella chejuensis KCTC 2396, complete genomehypothetical protein3e-1272.4
NC_017192:2216914:223378822337882234642855Arcobacter sp. L, complete genomehypothetical protein3e-1272.4
NC_014323:4619344:463808446380844638857774Herbaspirillum seropedicae SmR1 chromosome, complete genometype IV / VI secretion system transmembrane protein1e-1170.5
NC_016822:246715:262786262786263547762Shigella sonnei 53G, complete genomeputative membrane protein Aec263e-1169.3
CP002185:234719:250784250784251545762Escherichia coli W, complete genomeT6SS-associated protein4e-1168.6
NC_002947:4604582:460945446094544610386933Pseudomonas putida KT2440, complete genomehypothetical protein6e-1168.2
NC_014228:4331327:434755743475574348324768Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of SST VI cluster)8e-1167.8
NC_004578:6138669:616088461608846161759876Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1067.4
NC_010086:871723:8897988897988910931296Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion system OmpA/MotB family protein8e-1167.4
NC_010805:1576735:1584211158421115855091299Burkholderia multivorans ATCC 17616 chromosome 2, completeOmpA/MotB domain protein8e-1167.4
NC_007510:409843:420931420931421713783Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein5e-1065.1
NC_004605:1092476:1098604109860410999051302Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein8e-1064.3
NC_009439:101174:100296100296101177882Pseudomonas mendocina ymp, complete genomehypothetical protein1e-0963.5
NC_008391:271254:2861002861002873981299Burkholderia cepacia AMMD chromosome 2, complete sequenceOmpA/MotB domain protein2e-0963.5
NC_008390:407315:421936421936422718783Burkholderia cepacia AMMD chromosome 1, complete sequencehypothetical protein2e-0963.2
NC_015381:429940:446062446062446847786Burkholderia gladioli BSR3 chromosome 1, complete sequenceOmpA family protein2e-0962.8
NC_007434:3973145:397461139746113975273663Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein3e-0962.4
NC_015740:110633:129227129227130108882Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-0962.4
NC_006350:3710641:371639137163913717176786Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-0962
NC_009074:3559211:356550135655013566286786Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein4e-0962
NC_009076:3564500:356693035669303567715786Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein4e-0962
NC_007511:1094050:1108818110881811101221305Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein8e-0960.8
NC_010717:3868000:387028538702853871073789Xanthomonas oryzae pv. oryzae PXO99A, complete genomehypothetical protein3e-0858.9
NC_014310:785220:802006802006802797792Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein5e-0858.5
NC_008313:691692:7089587089587102351278Ralstonia eutropha H16 chromosome 1, complete sequenceouter membrane protein2e-0653.1
NC_005773:106000:148075148075148788714Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein4e-0652