Pre_GI: BLASTP Hits

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Query: NC_004838:51013:54281 Yersinia pestis KIM plasmid pMT-1, complete sequence

Start: 54281, End: 54481, Length: 201

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009378:106193:118515118515118715201Yersinia pestis Pestoides F plasmid MT, complete sequencetransposase1e-32138
NC_005815:61148:101558101558101758201Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completetransposase1e-32138
NC_008120:62000:779777797778177201Yersinia pestis Antiqua plasmid pMT, complete sequencetransposase1e-32138
NC_010158:92819:961509615096275126Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceputative transposase, truncation6e-1889.4
NC_007414:56508:881438814388415273Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequenceputative transposase7e-1372.8
NC_011750:1094000:109693310969331097265333Escherichia coli IAI39 chromosome, complete genome3e-0960.5
NC_017328:1075535:109376110937611094240480Shigella flexneri 2002017 chromosome, complete genomeIS629 orfB4e-0960.1
NC_010660:86445:901579015790975819Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequenceIS3 family element, transposase orfB8e-0959.3
NC_007607:87000:119550119550120263714Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceIS600 ORF28e-0959.3
NC_011750:919953:922158922158922640483Escherichia coli IAI39 chromosome, complete genometransposase ORF B (fragment), IS6291e-0858.9
CU928145:3360967:336823133682313368803573Escherichia coli 55989 chromosome, complete genometransposase ORF B (fragment), IS6291e-0858.5
NC_011748:3360967:336823133682313368803573Escherichia coli 55989, complete genometransposase ORF B (fragment), IS6291e-0858.5
NC_017328:3088907:311449031144903114969480Shigella flexneri 2002017 chromosome, complete genomeIS629 ORF21e-0858.5
NC_016901:2661971:267494926749492675758810Shewanella baltica OS678 chromosome, complete genomeintegrase catalytic subunit2e-0857.8
NC_016901:2070121:208788420878842088693810Shewanella baltica OS678 chromosome, complete genomeintegrase catalytic subunit2e-0857.8
NC_009997:2069894:208729720872972088106810Shewanella baltica OS195, complete genomeIntegrase catalytic region2e-0857.8
NC_009997:3661083:367666036766603677469810Shewanella baltica OS195, complete genomeIntegrase catalytic region2e-0857.8
NC_003134:64672:77583775837766684Yersinia pestis CO92 plasmid pMT1, complete sequence2e-0857.8
NC_011750:3545466:355948935594893559779291Escherichia coli IAI39 chromosome, complete genometransposase ORF B (fragment), IS6292e-0857.4
NC_009999:38832:617086170862397690Shewanella baltica OS195 plasmid pS19502, complete sequenceIntegrase catalytic region5e-0856.6
NC_009052:144619:149905149905150714810Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-0856.2
NC_009052:1211989:123378812337881234597810Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-0856.2
NC_009052:4168776:417125741712574172066810Shewanella baltica OS155, complete genomeIntegrase, catalytic region5e-0856.2
NC_004347:1038253:106206410620641062873810Shewanella oneidensis MR-1, complete genomeISSod1, transposase OrfB8e-0855.8
NC_004349:3938:214882148822297810Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod1, transposase OrfB8e-0855.8
NC_004349:3938:195231952320332810Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSod1, transposase OrfB8e-0855.8
NC_004347:4441110:445597944559794456788810Shewanella oneidensis MR-1, complete genomeISSod1, transposase OrfB8e-0855.8
NC_002655:1053082:107293210729321073750819Escherichia coli O157:H7 EDL933, complete genomeunknown in IS6001e-0755.5
NC_002695:1364833:138476713847671385585819Escherichia coli O157:H7 str. Sakai, complete genomeputative transposase1e-0755.5
NC_002655:1448605:146853914685391469357819Escherichia coli O157:H7 EDL933, complete genomeunknown in IS6001e-0755.5
NC_011353:1307106:132835313283531329171819Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeISSd1, transposase orfB1e-0755.5
NC_013008:1307392:132863913286391329457819Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase ISSd11e-0755.5
NC_013361:1284579:130535013053501306168819Escherichia coli O26:H11 str. 11368 chromosome, complete genomeIS600 transposase Orf21e-0755.5
NC_016822:1304398:131743013174301318053624Shigella sonnei 53G, complete genomeintegrase1e-0755.5
NC_017328:1075535:110030311003031101121819Shigella flexneri 2002017 chromosome, complete genomeISSd1, transposase orfA/B, fusion1e-0755.5
NC_016822:3420826:343561234356123436172561Shigella sonnei 53G, complete genomeintegrase1e-0755.5
NC_013361:1754346:176089517608951761713819Escherichia coli O26:H11 str. 11368 chromosome, complete genome1e-0755.5
NC_012967:4473368:449281844928184493636819Escherichia coli B str. REL606 chromosome, complete genomeIS600 ORF2-like protein1e-0755.5
NC_012947:3917619:392047239204723921290819Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeIntegrase catalytic region1e-0755.5
NC_011745:1287714:128771412877141288532819Escherichia coli ED1a chromosome, complete genometransposase ORF B, IS6001e-0755.5
CP002797:4603787:464102846410284641846819Escherichia coli NA114, complete genomePutative transposase1e-0755.5
NC_004431:3409389:342593134259313426749819Escherichia coli CFT073, complete genomeTransposase insF for insertion sequence IS3A/B/C/D/E/fA1e-0755.5
NC_007606:4182188:418409841840984184811714Shigella dysenteriae Sd197, complete genomeIS600 ORF21e-0755.5
NC_007384:1320287:132202113220211322734714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007606:4182188:420070942007094201422714Shigella dysenteriae Sd197, complete genomeIS600 ORF21e-0755.5
NC_016822:3946500:395327339532733953986714Shigella sonnei 53G, complete genomeIS600 ORF21e-0755.5
NC_016822:2940000:294019729401972940910714Shigella sonnei 53G, complete genomeIS600 ORF21e-0755.5
NC_016822:2678691:269934126993412700054714Shigella sonnei 53G, complete genomeIS600 ORF21e-0755.5
NC_016822:1304398:132645313264531327166714Shigella sonnei 53G, complete genomeIS600 ORF21e-0755.5
NC_007384:307013:322139322139322852714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007384:1320287:133458913345891335302714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007384:2007467:201299420129942013707714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007384:2007467:202455520245552025268714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007385:157516:174125174125174838714Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS600 ORF21e-0755.5
NC_007384:1320287:134361213436121344325714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007384:3741708:375527037552703755983714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_007385:157516:165512165512166225714Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS600 ORF21e-0755.5
NC_007384:307013:316680316680317393714Shigella sonnei Ss046, complete genomeIS600 ORF21e-0755.5
NC_016822:3420826:342689634268963427609714Shigella sonnei 53G, complete genomehypothetical protein1e-0755.5
NC_016822:267758:284840284840285553714Shigella sonnei 53G, complete genomehypothetical protein1e-0755.5
NC_011750:4947500:496193449619344962752819Escherichia coli IAI39 chromosome, complete genometransposase ORF B, IS6001e-0755.1
NC_011750:1094000:109861110986111099429819Escherichia coli IAI39 chromosome, complete genometransposase ORF B, IS6001e-0755.1
NC_011750:1565000:156708815670881567906819Escherichia coli IAI39 chromosome, complete genometransposase ORF B, IS6001e-0755.1
NC_004337:2035945:2050214205021420512481035Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.7
NC_007607:87000:923709237093083714Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceIS600 ORF22e-0754.7
NC_008258:1076922:109926510992651099903639Shigella flexneri 5 str. 8401, complete genomeIS600 ORF22e-0754.7
NC_004741:2169877:218498421849842185697714Shigella flexneri 2a str. 2457T, complete genome2e-0754.3
NC_007606:1209132:122664712266471227360714Shigella dysenteriae Sd197, complete genomeIS600 ORF22e-0754.3
NC_004741:4364235:438292043829204383633714Shigella flexneri 2a str. 2457T, complete genomeIS600 orfB2e-0754.3
NC_008258:2045000:205753920575392058252714Shigella flexneri 5 str. 8401, complete genomeIS600 ORF22e-0754.3
NC_004337:3590323:385770838577083858526819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_008258:1873805:188531218853121886025714Shigella flexneri 5 str. 8401, complete genomeIS600 ORF22e-0754.3
NC_010658:1933605:195110819511081951926819Shigella boydii CDC 3083-94, complete genomeISSd1, transposase orfB2e-0754.3
NC_017328:335160:348267348267349085819Shigella flexneri 2002017 chromosome, complete genomeIS600 ORF22e-0754.3
NC_004851:191709:206328206328207146819Shigella flexneri 2a str. 301 plasmid pCP301, complete sequenceIS600 ORF22e-0754.3
NC_004337:309833:325574325574326392819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_004337:309833:311782311782312600819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_017328:4417000:443416444341644434982819Shigella flexneri 2002017 chromosome, complete genomeIS600 ORF22e-0754.3
NC_017328:2090679:210447321044732105291819Shigella flexneri 2002017 chromosome, complete genomeputative IS1 encoded protein2e-0754.3
NC_007606:1515403:153269615326961533409714Shigella dysenteriae Sd197, complete genomeIS600 ORF22e-0754.3
NC_004337:2185282:220413122041312204949819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_008258:1873805:188146918814691882182714Shigella flexneri 5 str. 8401, complete genomeIS600 ORF22e-0754.3
NC_008258:1934479:193960019396001940313714Shigella flexneri 5 str. 8401, complete genomeIS600 ORF22e-0754.3
NC_017328:2225418:224422722442272245045819Shigella flexneri 2002017 chromosome, complete genomeIS600 ORF22e-0754.3
NC_017319:192482:206211206211207029819Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS600 ORF22e-0754.3
NC_004741:310382:315635315635316348714Shigella flexneri 2a str. 2457T, complete genomeIS600 orfB2e-0754.3
NC_004741:310382:324718324718325431714Shigella flexneri 2a str. 2457T, complete genomeIS600 orfB2e-0754.3
NC_004741:2593012:259463025946302595343714Shigella flexneri 2a str. 2457T, complete genomeIS600 orfB2e-0754.3
NC_007613:1038000:103859910385991039312714Shigella boydii Sb227, complete genomeIS600 ORF22e-0754.3
NC_017328:3935185:393746739374673938285819Shigella flexneri 2002017 chromosome, complete genomeIS600 orfB2e-0754.3
NC_017319:192482:196656196656197474819Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS600 ORF22e-0754.3
NC_004337:309833:330404330404331222819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_004337:3590323:391180839118083912626819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_004337:309833:316385316385317203819Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_004851:191709:196725196725197546822Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence2e-0754.3
NC_008258:2190635:220577822057782206491714Shigella flexneri 5 str. 8401, complete genomeIS600 ORF22e-0754.3
NC_004337:1065609:108111810811181081861744Shigella flexneri 2a str. 301, complete genomeIS600 ORF22e-0754.3
NC_015731:2460248:246967224696722470547876Nitrosomonas sp. Is79A3 chromosome, complete genomeIntegrase catalytic subunit5e-0753.1
NC_017319:155958:167525167525168343819Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceIS600 ORF25e-0753.1
NC_007951:2087385:211587921158792116706828Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative IS1 transposase, InsB2e-0651.6
NC_008750:2332000:234997823499782350727750Shewanella sp. W3-18-1, complete genomeIntegrase, catalytic region2e-0650.8
NC_010623:1961685:197065519706551971545891Burkholderia phymatum STM815 chromosome 2, complete sequenceIntegrase catalytic region6e-0649.7
NC_003295:1654000:166176416617641662654891Ralstonia solanacearum GMI1000, complete genomeISRSO8-TRANSPOSASE ORFB PROTEIN6e-0649.7
NC_003296:673790:688094688094688984891Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeISRSO8-TRANSPOSASE ORFB PROTEIN6e-0649.7
NC_009255:916000:924613924613925392780Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit6e-0649.7
NC_009255:916000:923757923757924608852Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit9e-0648.9
NC_009255:1250939:128618812861881287039852Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit9e-0648.9
NC_009254:637952:695656695656696507852Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit9e-0648.9