Pre_GI: BLASTP Hits

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Query: NC_004741:366822:371558 Shigella flexneri 2a str. 2457T, complete genome

Start: 371558, End: 372154, Length: 597

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a highly virulent strain that has been widely used for genetic and clinical research. Causes enteric disease. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:385552:390288390288390884597Shigella flexneri 2002017 chromosome, complete genome4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein2e-112404
NC_004337:367687:372424372424373020597Shigella flexneri 2a str. 301, complete genome4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein2e-112404
NC_008258:401786:406522406522407112591Shigella flexneri 5 str. 8401, complete genome4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis5e-109393
NC_015663:2694373:269966026996602700253594Enterobacter aerogenes KCTC 2190 chromosome, complete genomeoxidative-stress-resistance chaperone3e-98357
NC_020181:2714559:274553927455392746132594Enterobacter aerogenes EA1509E, complete genomeDJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp313e-98357
NC_004459:1794540:180655918065591807158600Vibrio vulnificus CMCP6 chromosome I, complete sequence4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme4e-47187
NC_007520:1940120:194539319453931945950558Thiomicrospira crunogena XCL-2, complete genomeDJ-12e-27122
NC_021182:2965395:297002429700242970590567Clostridium pasteurianum BC1, complete genomeDJ-1 family protein1e-26119
NC_014935:342491:344988344988345548561Nitratifractor saLSUginis DSM 16511 chromosome, complete genomedj-1 family protein7e-26117
NC_013192:815854:819631819631820194564Leptotrichia buccalis DSM 1135, complete genomeDJ-1 family protein1e-22106
NC_008609:2254392:2278418227841822795841167Pelobacter propionicus DSM 2379, complete genomemetal dependent phosphohydrolase3e-22104
NC_013851:3392644:341080334108033411354552Allochromatium vinosum DSM 180 chromosome, complete genomeDJ-1 family protein5e-22103
NC_008710:621822:652860652860653405546Borrelia turicatae 91E135, complete genome4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme1e-2099.4
NC_012225:2523262:254132125413212541875555Brachyspira hyodysenteriae WA1, complete genomeThiJ/PfpI domain-containing protein5e-1994
NC_013517:4117666:411936641193664119917552Sebaldella termitidis ATCC 33386, complete genomeDJ-1 family protein2e-1892
NC_020134:845164:851079851079851621543Clostridium stercorarium subsp. stercorarium DSM 8532, completeDJ-1 family protein4e-1891.3
NC_009442:1446508:145045514504551451003549Streptococcus suis 05ZYH33 chromosome, complete genomeintracellular protease/amidase1e-1686.7
NC_009443:1445936:144988114498811450429549Streptococcus suis 98HAH33, complete genomeintracellular protease/amidase1e-1686.7
NC_003366:2356148:236517423651742365755582Clostridium perfringens str. 13, complete genome4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein9e-1786.7
NC_012926:1496510:150045715004571500996540Streptococcus suis BM407 chromosome, complete genomeDJ-1/PfpI family protein1e-1686.3
NC_012924:1446190:145013714501371450676540Streptococcus suis SC84, complete genomeDJ-1/PfpI family protein1e-1686.3
NC_012925:1357783:136173013617301362269540Streptococcus suis P1/7, complete genomeDJ-1/PfpI family protein1e-1686.3
NC_008262:2242432:225167022516702252245576Clostridium perfringens SM101, complete genomeDJ-1 family protein2e-1685.5
NC_013171:312500:325596325596326180585Anaerococcus prevotii DSM 20548, complete genomeDJ-1 family protein6e-1477.4
NC_015501:556994:576024576024576572549Porphyromonas asaccharolytica DSM 20707 chromosome, completeDJ-1 family protein4e-1374.3
NC_010163:1193237:119704311970431197588546Acholeplasma laidlawii PG-8A chromosome, complete genomeglutamine amidotransferase superfamily, DJ-1/PfpI family protein8e-1063.5
NC_013510:3324978:333931733393173339895579Thermomonospora curvata DSM 43183, complete genomeintracellular protease, PfpI family4e-0961.2
NC_016114:648422:650946650946651512567Streptomyces flavogriseus ATCC 33331 chromosome, complete genomePfpi family intracellular protease7e-0960.5
NC_010510:339879:353090353090353659570Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintracellular protease, PfpI family1e-0859.7
NC_015277:380624:394511394511395071561Sphingobacterium sp. 21 chromosome, complete genomeintracellular protease, PfpI family4e-0857.8
NC_014299:82584:134085134085134639555Halalkalicoccus jeotgali B3 plasmid 2, complete sequenceintracellular protease, PfpI family protein3e-0651.6
NC_015474:252390:255828255828256328501Pyrococcus sp. NA2 chromosome, complete genomeintracellular protease6e-0650.8
NC_014614:356746:375197375197375697501Clostridium sticklandii, complete genomeIntracellular protease 1 (Intracellular protease I)7e-0650.4
NC_014222:799229:808760808760809278519Methanococcus voltae A3 chromosome, complete genomeintracellular protease, PfpI family9e-0650.1