Pre_GI: BLASTP Hits

Some Help

Query: NC_004741:2593012:2604133 Shigella flexneri 2a str. 2457T, complete genome

Start: 2604133, End: 2604639, Length: 507

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a highly virulent strain that has been widely used for genetic and clinical research. Causes enteric disease. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008344:669498:677594677594678100507Nitrosomonas eutropha C91, complete genomeprotein tyrosine phosphatase7e-98355
NC_008344:2374761:238716023871602387666507Nitrosomonas eutropha C91, complete genomeprotein tyrosine phosphatase7e-98355
NC_009138:3153576:316717631671763167682507Herminiimonas arsenicoxydans, complete genomearsenate reductase2e-65248
NC_009138:467268:503274503274503789516Herminiimonas arsenicoxydans, complete genomearsenate reductase5e-65246
NC_010681:221416:223174223174223695522Burkholderia phytofirmans PsJN chromosome 1, complete sequenceprotein tyrosine phosphatase2e-64244
NC_009138:1974935:198147119814711981965495Herminiimonas arsenicoxydans, complete genomeArsenate reductase2e-56218
NC_010170:4800000:481040648104064810903498Bordetella petrii, complete genomehypothetical protein1e-56218
NC_010084:2484000:252904025290402529528489Burkholderia multivorans ATCC 17616 chromosome 1, completeprotein tyrosine phosphatase3e-55213
NC_016589:2875000:287945328794532879968516Burkholderia sp. YI23 chromosome 1, complete sequenceprotein tyrosine phosphatase4e-54210
NC_010087:376918:379726379726380220495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase1e-53208
NC_014394:2577949:258311925831192583616498Gallionella capsiferriformans ES-2 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight3e-53207
NC_014640:5047201:505290950529095053409501Achromobacter xylosoxidans A8 chromosome, complete genomeprotein tyrosine phosphatase4e-53206
NC_009720:4367584:438109743810974381984888Xanthobacter autotrophicus Py2, complete genomeprotein tyrosine phosphatase1e-52205
NC_015186:2908387:292664329266432927167525Acidiphilium multivorum AIU301, complete genomearsenate reductase2e-52204
NC_010801:505000:508374508374508868495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein-tyrosine phosphatase6e-52202
NC_010087:376918:415990415990416484495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase6e-52202
NC_010682:1913941:191394119139411914435495Ralstonia pickettii 12J chromosome 1, complete sequenceprotein tyrosine phosphatase1e-51202
NC_011894:5787990:580219358021935802720528Methylobacterium nodulans ORS 2060, complete genomeProtein-tyrosine phosphatase, low molecular weight2e-48191
NC_011894:5787990:583184258318425832369528Methylobacterium nodulans ORS 2060, complete genomeProtein-tyrosine phosphatase, low molecular weight2e-48191
NC_007298:750361:767392767392767886495Dechloromonas aromatica RCB, complete genomeLow molecular weight phosphotyrosine protein phosphatase3e-47187
NC_011071:2207385:222616322261632226696534Stenotrophomonas maltophilia R551-3, complete genomeprotein tyrosine phosphatase5e-46183
NC_010102:4557037:455703745570374557531495Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-40162
NC_010087:376918:379221379221379715495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase7e-39159
NC_015136:912276:934343934343934837495Burkholderia sp. CCGE1001 chromosome 1, complete sequenceprotein tyrosine phosphatase8e-38155
NC_010682:3745000:374687037468703747364495Ralstonia pickettii 12J chromosome 1, complete sequenceprotein tyrosine phosphatase3e-37154
NC_011071:2207385:222253222225322223023492Stenotrophomonas maltophilia R551-3, complete genomeprotein tyrosine phosphatase6e-37153
NC_010515:1124298:115005811500581150552495Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein tyrosine phosphatase1e-36152
NC_010943:2422838:245363324536332454124492Stenotrophomonas maltophilia K279a, complete genomeputative arsenate reductase2e-36151
NC_010524:3445641:344973734497373450243507Leptothrix cholodnii SP-6, complete genomeprotein tyrosine phosphatase3e-36150
NC_003296:1419992:142416614241661424660495Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE ARSENATE REDUCTASE (ARSENICAL PUMP MODIFIER) PROTEIN5e-36150
NC_007509:3668:485964859649102507Burkholderia sp. 383 chromosome 3, complete sequenceprotein tyrosine phosphatase9e-36149
NC_018080:6048516:607444260744426074912471Pseudomonas aeruginosa DK2 chromosome, complete genomeprotein tyrosine phosphatase4e-35147
NC_010087:376918:416501416501416995495Burkholderia multivorans ATCC 17616 chromosome 3, completeprotein tyrosine phosphatase2e-35147
NC_010801:505000:507863507863508357495Burkholderia multivorans ATCC 17616 chromosome 3, completearsenate reductase2e-35147
NC_015733:5909821:591939659193965919920525Pseudomonas putida S16 chromosome, complete genomeprotein tyrosine phosphatase1e-34145
NC_002947:2157648:217477121747712175259489Pseudomonas putida KT2440, complete genomearsenate reductase4e-33140
NC_011992:2279752:228745422874542287933480Acidovorax ebreus TPSY, complete genomeProtein-tyrosine phosphatase, low molecular weight1e-32138
NC_011149:2040396:204365620436562044132477Salmonella enterica subsp. enterica serovar Agona str. SL483,arsenate reductase1e-32138
NC_010794:1476494:148033114803311480765435Methylacidiphilum infernorum V4, complete genomeArsenate reductase1e-32138
NC_005085:2609934:262378826237882624282495Chromobacterium violaceum ATCC 12472, complete genomearsenate reductase4e-31133
NC_017986:331610:346330346330346806477Pseudomonas putida ND6 chromosome, complete genomeprotein tyrosine phosphatase1e-30132
NC_007908:4069150:408702840870284087510483Rhodoferax ferrireducens T118, complete genomeprotein tyrosine phosphatase6e-30129
NC_010410:3606826:368551036855103685983474Acinetobacter baumannii AYE, complete genomeProtein arsC (Arsenate reductase) (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase)2e-26118
NC_018080:6048516:607364460736446074057414Pseudomonas aeruginosa DK2 chromosome, complete genomeArsR family transcriptional regulator4e-2097.1
NC_018012:1789028:180502218050221805456435Thiocystis violascens DSM 198 chromosome, complete genomeprotein-tyrosine-phosphatase2e-1994.7
NC_011586:268927:273864273864274283420Acinetobacter baumannii AB0057 chromosome, complete genomearsenate reductase3e-1994.4
NC_017986:331610:345532345532345945414Pseudomonas putida ND6 chromosome, complete genomeArsR family transcriptional regulator1e-1892
NC_012032:1827244:183342318334231834184762Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, ArsR family4e-1890.5
NC_010175:1825878:183205718320571832818762Chloroflexus aurantiacus J-10-fl, complete genomelow molecular weight phosphotyrosine protein phosphatase4e-1890.5
NC_007519:2773000:278705527870552787489435Desulfovibrio alaskensis G20 chromosome, complete genomeprotein tyrosine phosphatase6e-1890.1
NC_017192:276187:298851298851299252402Arcobacter sp. L, complete genomearsenate reductase1e-1789
NC_014507:863210:894333894333894740408Methanoplanus petrolearius DSM 11571 chromosome, complete genomeprotein-tyrosine phosphatase, low molecular weight2e-1685.1
NC_019897:3669888:369366136936613694083423Thermobacillus composti KWC4 chromosome, complete genomethioredoxin-dependent arsenate reductase4e-1580.9
NC_013205:576583:597908597908598402495Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,arsenate reductase (thioredoxin)3e-1580.9
NC_014976:627935:633415633415633834420Bacillus subtilis BSn5 chromosome, complete genomearsenate reductase6e-1580.1
NC_020244:4020315:402943940294394029867429Bacillus subtilis XF-1, complete genomethioredoxin-coupled arsenate reductase7e-1579.7
NC_016047:683368:692482692482692901420Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completearsenate reductase8e-1579.7
NC_014206:3391352:341419634141963414615420Geobacillus sp. C56-T3 chromosome, complete genomearsenate reductase (thioredoxin)1e-1479.3
NC_016593:596500:621621621621622043423Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-1479.3
NC_006510:591339:614664614664615086423Geobacillus kaustophilus HTA426, complete genomearsenate reductase1e-1479.3
NC_006582:883922:905996905996906415420Bacillus clausii KSM-K16, complete genomearsenate reductase2e-1478.2
NC_010730:952574:969811969811970236426Sulfurihydrogenibium sp. YO3AOP1, complete genomeprotein tyrosine phosphatase2e-1478.2
NC_014650:1862165:186324718632471863669423Geobacillus sp. Y4.1MC1 chromosome, complete genomearsenate reductase (thioredoxin)3e-1477.4
NC_015660:1869962:188212618821261882548423Geobacillus thermoglucosidasius C56-YS93 chromosome, completeprotein tyrosine phosphatase3e-1477.4
NC_011830:1288984:130855513085551308989435Desulfitobacterium hafniense DCB-2, complete genomearsenate reductase (thioredoxin)5e-1477
NC_008751:1736512:174248217424821742925444Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein tyrosine phosphatase2e-1375.1
NC_013939:1460142:146644414664441466860417Deferribacter desulfuricans SSM1, complete genomearsenate reductase (glutaredoxin)5e-1373.9
NC_002937:1706000:172533217253321725775444Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completearsenate reductase4e-1373.9
NC_013440:3870697:388703438870343887897864Haliangium ochraceum DSM 14365, complete genomeProtein-tyrosine phosphatase, low molecular weight8e-1373.2
NC_015690:3477573:352058535205853521007423Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsC1e-1272.4
NC_015733:5909821:592025159202515920574324Pseudomonas putida S16 chromosome, complete genomeArsR family transcriptional regulator2e-1272
NC_007907:4714844:473024847302484730661414Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1270.9
NC_016771:2933886:295141529514152951819405Bacillus cereus NC7401, complete genomearsenate reductase1e-1065.9
NC_011658:2978000:299553829955382995942405Bacillus cereus AH187 chromosome, complete genomearsenate reductase1e-1065.9
NC_009674:1707944:170902617090261709430405Bacillus cytotoxicus NVH 391-98 chromosome, complete genomearsenate reductase6e-1063.5
NC_007333:1743890:179224417922441792660417Thermobifida fusca YX, complete genomeLow molecular weight phosphotyrosine protein phosphatase9e-1062.8
NC_014334:2696000:271340127134012713814414Lactobacillus casei str. Zhang chromosome, complete genomeprotein-tyrosine-phosphatase1e-0962.8
NC_015320:211147:227558227558227944387Archaeoglobus veneficus SNP6 chromosome, complete genomeprotein tyrosine phosphatase2e-0961.6
NC_008054:930890:931901931901932299399Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative phosphotyrosine protein phosphatase2e-0961.6
NC_008529:887008:919287919287919685399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase2e-0961.6
NC_008529:887008:939733939733940131399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase2e-0961.6
NC_008529:906576:939733939733940131399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase2e-0961.6
NC_008529:906576:919287919287919685399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase2e-0961.6
NC_008529:918277:919287919287919685399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase2e-0961.6
NC_008529:918277:939733939733940131399Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeProtein-tyrosine-phosphatase2e-0961.6
NC_003888:7561923:760623876062387606651414Streptomyces coelicolor A3(2), complete genomearsenate reductase2e-0858.5
NC_013174:373726:3884163884163894291014Jonesia denitrificans DSM 20603, complete genometranscriptional regulator, ArsR family3e-0857.8
NC_013174:373726:387942387942388358417Jonesia denitrificans DSM 20603, complete genomeProtein-tyrosine phosphatase, low molecular weight3e-0857.8
NC_015420:35384:783878388254417Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, completeprotein tyrosine phosphatase4e-0857.4
NC_013929:2696648:270164727016472702066420Streptomyces scabiei 87.22 chromosome, complete genomeprotein phosphatase5e-0857
NC_015696:285456:302594302594302962369Francisella sp. TX077308 chromosome, complete genomeArsenate reductase7e-0856.6
NC_014666:8016066:803435880343588034765408Frankia sp. EuI1c chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight8e-0856.6
NC_003366:1013773:102677110267711027169399Clostridium perfringens str. 13, complete genomeprobable arsenate reductase1e-0755.8
NC_008261:967973:988237988237988635399Clostridium perfringens ATCC 13124, complete genomearsenate reductase ArsC1e-0755.5
NC_012883:1522920:153024515302451530694450Thermococcus sibiricus MM 739, complete genomeTrx-linked arsenate reductase2e-0755.1
NC_018867:179975:205501205501205914414Dehalobacter sp. CF chromosome, complete genomeArsenate reductase ArsC5e-0753.9
NC_018866:108812:137906137906138319414Dehalobacter sp. DCA chromosome, complete genomeArsenate reductase ArsC5e-0753.9
NC_004463:1369165:137250913725091372976468Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein5e-0753.9
NC_014151:4021394:404062440406244041076453Cellulomonas flavigena DSM 20109 chromosome, complete genomeProtein-tyrosine phosphatase, low molecular weight4e-0753.9
NC_007519:2773000:278661827866182787058441Desulfovibrio alaskensis G20 chromosome, complete genomeprotein tyrosine phosphatase9e-0752.8
NC_014624:224213:240216240216240605390Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-0652.4
NC_015501:1762450:177617317761731776556384Porphyromonas asaccharolytica DSM 20707 chromosome, completeprotein tyrosine phosphatase2e-0652
NC_013161:3448966:345016634501663450558393Cyanothece sp. PCC 8802, complete genomearsenate reductase, glutathione/glutaredoxin type2e-0651.6
NC_011726:2793669:281089928108992811291393Cyanothece sp. PCC 8801, complete genomearsenate reductase, glutathione/glutaredoxin type3e-0651.2