Pre_GI: BLASTP Hits

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Query: NC_004741:2081649:2093449 Shigella flexneri 2a str. 2457T, complete genome

Start: 2093449, End: 2093823, Length: 375

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a highly virulent strain that has been widely used for genetic and clinical research. Causes enteric disease. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017328:2153083:216488321648832165257375Shigella flexneri 2002017 chromosome, complete genomeBactoprenol-linked glucose translocase1e-55214
NC_004337:2098736:211058221105822110956375Shigella flexneri 2a str. 301, complete genomeglycosyl translocase1e-55214
NC_014306:3210311:322003932200393220413375Erwinia billingiae Eb661, complete genomeBactoprenol-linked glucose translocase2e-1787.8
NC_016513:1185241:119375811937581194117360Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completebactoprenol-linked glucose translocase9e-1785.5
NC_015968:2845751:285455328545532854915363Enterobacter asburiae LF7a chromosome, complete genomeGtrA family protein1e-1581.6
NC_008258:269806:276837276837277199363Shigella flexneri 5 str. 8401, complete genomebactoprenol-linked glucose translocase2e-1581.3
NC_006905:401154:412629412629412997369Salmonella enterica subsp. enterica serovar Choleraesuis strBactoprenol-linked glucose translocase2e-1581.3
NC_012125:600586:616406616406616768363Salmonella enterica subsp. enterica serovar Paratyphi C strainglycosyl translocase3e-1580.9
NC_006511:2251022:225684622568462257208363Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbactoprenol-linked glucose translocase4e-1580.1
NC_003197:606048:617360617360617722363Salmonella typhimurium LT2, complete genomeputative glycosyl translocase4e-1580.1
NC_006511:2467763:248678024867802487142363Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCO-antigen conversion: glucosyl transferase4e-1580.1
NC_004631:2366335:237142323714232371785363Salmonella enterica subsp. enterica serovar Typhi Ty2, completebactoprenol-linked glucose translocase4e-1580.1
NC_006905:651732:667560667560667922363Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycosyl translocase4e-1580.1
NC_003198:598000:609316609316609678363Salmonella enterica subsp. enterica serovar Typhi str. CT18,bactoprenol-linked glucose translocase4e-1580.1
NC_011083:654479:665790665790666152363Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bactoprenol-linked glucose translocase4e-1580.1
NC_011149:588895:600206600206600568363Salmonella enterica subsp. enterica serovar Agona str. SL483,bactoprenol-linked glucose translocase4e-1580.1
NC_011080:610428:621769621769622131363Salmonella enterica subsp. enterica serovar Newport str. SL254,bactoprenol-linked glucose translocase4e-1580.1
NC_006905:651732:660997660997661359363Salmonella enterica subsp. enterica serovar Choleraesuis strputative glycosyl translocase4e-1580.1
NC_011094:688626:700281700281700643363Salmonella enterica subsp. enterica serovar Schwarzengrund strbactoprenol-linked glucose translocase4e-1580.1
NC_011147:2247460:225203022520302252392363Salmonella enterica subsp. enterica serovar Paratyphi A strbactoprenol-linked glucose translocase4e-1580.1
NC_016863:606742:618053618053618415363Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1CDP-6-deoxy-delta-3,4-glucoseen reductase4e-1580.1
NC_016860:644095:655407655407655769363Salmonella enterica subsp. enterica serovar Typhimurium strputative glucose translocase4e-1580.1
NC_016857:604792:616848616848617210363Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bactoprenol-linked glucose translocase4e-1580.1
NC_016856:606742:618054618054618416363Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glycosyl translocase4e-1580.1
NC_016810:604813:616848616848617210363Salmonella enterica subsp. enterica serovar Typhimurium strbactoprenol-linked glucose translocase4e-1580.1
NC_012125:600586:609844609844610206363Salmonella enterica subsp. enterica serovar Paratyphi C strainglycosyl translocase4e-1580.1
NC_011294:585500:596818596818597180363Salmonella enterica subsp. enterica serovar Enteritidis strbactoprenol-linked glucose translocase4e-1580.1
NC_011205:645591:662352662352662714363Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bactoprenol-linked glucose translocase4e-1580.1
NC_011147:2463299:248231624823162482678363Salmonella enterica subsp. enterica serovar Paratyphi A strbactoprenol-linked glucose translocase4e-1580.1
NC_017328:335160:347064347064347426363Shigella flexneri 2002017 chromosome, complete genomeBactoprenol-linked glucose translocase4e-1579.7
NC_009792:1739970:174802717480271748452426Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein9e-1579
NC_011274:603901:615191615191615553363Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91bactoprenol-linked glucose translocase8e-1579
NC_004337:309833:317867317867318229363Shigella flexneri 2a str. 301, complete genomeputative flippase1e-1478.6
NC_004741:310382:323692323692324054363Shigella flexneri 2a str. 2457T, complete genomeputative flippase1e-1478.6
NC_016860:397138:409566409566409928363Salmonella enterica subsp. enterica serovar Typhimurium strbactoprenol-linked glucose translocase1e-1478.2
NC_011205:645591:657950657950658312363Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bactoprenol-linked glucose translocase1e-1478.2
NC_011083:403022:415404415404415766363Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bactoprenol-linked glucose translocase1e-1478.2
AC_000091:2462461:247330124733012473663363Escherichia coli W3110 DNA, complete genomebactoprenol-linked glucose translocase (flippase)2e-1477.8
NC_010473:2548946:255764225576422558004363Escherichia coli str. K-12 substr. DH10B, complete genomeCPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)2e-1477.8
NC_000913:2455037:246587724658772466239363Escherichia coli K12, complete genomeCPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)2e-1477.8
NC_012759:2342986:235168223516822352044363Escherichia coli BW2952 chromosome, complete genomeCPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase)2e-1477.8
NC_009778:2951207:297632529763252976687363Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1477.8
NC_011740:621408:630857630857631219363Escherichia fergusonii ATCC 35469, complete genomebactoprenol-linked glucose translocase (flippase) ; CPS-53 (KpLE1) prophage3e-1477.4
NC_014618:1752434:177176017717601772110351Enterobacter cloacae SCF1 chromosome, complete genomeGtrA family protein3e-1477.4
NC_012913:626449:634490634490634846357Aggregatibacter aphrophilus NJ8700, complete genomebactoprenol-linked glucose translocase9e-1475.5
NC_013956:1207500:121729712172971217665369Pantoea ananatis LMG 20103 chromosome, complete genomeGtrA1e-1375.1
NC_011205:2621415:262815626281562628545390Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bactoprenol-linked glucose transferase1e-1375.1
NC_011274:2483038:249192524919252492314390Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91bactoprenol-linked glucose transferase1e-1375.1
NC_011294:2492168:250105425010542501443390Salmonella enterica subsp. enterica serovar Enteritidis strbactoprenol-linked glucose transferase1e-1375.1
NC_011147:529458:540568540568540957390Salmonella enterica subsp. enterica serovar Paratyphi A strbactoprenol-linked glucose transferase3e-1373.9
NC_003198:2453074:246196024619602462349390Salmonella enterica subsp. enterica serovar Typhi str. CT18,bactoprenol-linked glucose transferase3e-1373.9
NC_004631:531254:542363542363542752390Salmonella enterica subsp. enterica serovar Typhi Ty2, completebactoprenol-linked glucose transferase3e-1373.9
NC_006511:529424:540534540534540923390Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbactoprenol-linked glucose transferase3e-1373.9
NC_014306:3210311:323353332335333233892360Erwinia billingiae Eb661, complete genomeBactoprenol-linked glucose translocase9e-1372
NC_013971:335247:350340350340350732393Erwinia amylovora ATCC 49946 chromosome, complete genomephage-encoded bactoprenol-linked glucose transferase3e-1167.4
NC_012880:135508:145783145783146142360Dickeya dadantii Ech703, complete genomeGtrA family protein6e-1166.2
NC_006300:600516:615930615930616304375Mannheimia succiniciproducens MBEL55E, complete genomehypothetical protein5e-1166.2
NC_016831:531404:542563542563542874312Salmonella enterica subsp. enterica serovar Gallinarum/pullorumbactoprenol-linked glucose transferase1e-0858.5
NC_017046:604789:616845616845617120276Salmonella enterica subsp. enterica serovar Typhimurium str. 798bactoprenol-linked glucose translocase1e-0858.2
NC_016832:2363136:236831123683112368586276Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bactoprenol-linked glucose translocase1e-0858.2
NC_016831:2402893:240730424073042407579276Salmonella enterica subsp. enterica serovar Gallinarum/pullorumbactoprenol-linked glucose translocase1e-0858.2
NC_010102:2495441:250042525004252500700276Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-0856.2
NC_016832:531208:542317542317542628312Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bactoprenol-linked glucose translocase1e-0652