Pre_GI: BLASTN Hits

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Query: NC_004668:546142 Enterococcus faecalis V583, complete genome

Start: 546142, End: 572275, Length: 26134

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006582:883922*88392291459930678Bacillus clausii KSM-K16, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006582:12970391297039132111124073Bacillus clausii KSM-K16, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020995:75131175131177460523295Enterococcus casseliflavus EC20, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020207:1614000*1614000163759923600Enterococcus faecium NRRL B-2354, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014654:646500*64650066530218803Halanaerobium sp. 'sapolanicus' chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008346:25232892523289256197838690Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete3e-0661.9BLASTN svgBLASTP svg