Pre_GI: BLASTN Hits

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Query: NC_004668:2198027 Enterococcus faecalis V583, complete genome

Start: 2198027, End: 2270099, Length: 72073

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014828:20386922038692208731548624Ethanoligenens harbinense YUAN-3 chromosome, complete genome2e-22117BLASTN svgBLASTP svg
NC_011898:3303381*3303381333934135961Clostridium cellulolyticum H10, complete genome6e-19105BLASTN svgBLASTP svg
NC_009089:12830001283000132421841219Clostridium difficile 630, complete genome6e-19105BLASTN svgBLASTP svg
NC_005707:12735127353784225108Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence2e-18103BLASTN svgBLASTP svg
NC_016048:28736692873669290769834030Oscillibacter valericigenes Sjm18-20, complete genome1e-17101BLASTN svgBLASTP svg
NC_013895:13328321332832138009947268Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete4e-1489.7BLASTN svgBLASTP svg
NC_013798:17787581778758180316524408Streptococcus gallolyticus UCN34, complete genome4e-1489.7BLASTN svgBLASTP svg
NC_009089:38898113889811392148531675Clostridium difficile 630, complete genome6e-1385.7BLASTN svgBLASTP svg
NC_009089:58165558165560656324909Clostridium difficile 630, complete genome6e-1385.7BLASTN svgBLASTP svg
NC_013792:109203*10920313509925897Bacillus pseudofirmus OF4 plasmid pBpOF4-01, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_021175:15976131597613162110823496Streptococcus oligofermentans AS 1.3089, complete genome9e-1281.8BLASTN svgBLASTP svg
NC_016048:3063888*3063888310642742540Oscillibacter valericigenes Sjm18-20, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_013316:40959054095905412999634092Clostridium difficile R20291, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_002758:43446243446245281818357Staphylococcus aureus subsp. aureus Mu50, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_003909:3587695*3587695360609918405Bacillus cereus ATCC 10987, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008600:3643905*3643905366318919285Bacillus thuringiensis str. Al Hakam, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_012472:3661912*3661912368119019279Bacillus cereus 03BB102, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_014828:1019533*1019533106523245700Ethanoligenens harbinense YUAN-3 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_012471:719000*71900075122032221Streptococcus equi subsp. equi 4047, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012781:2552723*2552723258830435582Eubacterium rectale ATCC 33656, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012781:700226*70022673549235267Eubacterium rectale ATCC 33656, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_016048:2343500*2343500236132917830Oscillibacter valericigenes Sjm18-20, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012781:33156143315614335472839115Eubacterium rectale ATCC 33656, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_009089:42807542807546635638282Clostridium difficile 630, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_009089:3935500*3935500397916543666Clostridium difficile 630, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_006958:18728491872849189317920331Corynebacterium glutamicum ATCC 13032, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_003450:18713771871377190288331507Corynebacterium glutamicum ATCC 13032, complete genome8e-0661.9BLASTN svgBLASTP svg