Pre_GI: BLASTP Hits

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Query: NC_004668:3184319:3208608 Enterococcus faecalis V583, complete genome

Start: 3208608, End: 3209618, Length: 1011

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017316:2710021:2729970272997027309801011Enterococcus faecalis OG1RF chromosome, complete genome[citrate [pro-3S]-lyase] ligase0687
NC_020291:4033000:4047557404755740486691113Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome[citrate [pro-3S]-lyase] ligase CitC7e-63241
NC_016605:233087:2504232504232514901068Pediococcus claussenii ATCC BAA-344 chromosome, complete genome[citrate (pro-3S)-lyase] ligase2e-58226
NC_004557:2711702:2715874271587427169261053Clostridium tetani E88, complete genomecitC, [citrate (pro-3S)-lyase] ligase2e-54212
NC_014364:2322269:2359504235950423605471044Spirochaeta smaragdinae DSM 11293 chromosome, complete genomecitrate lyase ligase1e-53210
NC_015389:616430:6753236753236763631041Coriobacterium glomerans PW2 chromosome, complete genomecitrate lyase ligase3e-52205
NC_014328:4387303:4409654440965444106941041Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecitrate (pro-3S)-lyase ligase4e-50198
NC_015578:3011133:3024882302488230259701089Treponema primitia ZAS-2 chromosome, complete genome[citrate (pro-3S)-lyase] ligase2e-49196
NC_015663:1:5259525962811023Enterobacter aerogenes KCTC 2190 chromosome, complete genomecitrate lyase ligase2e-46186
NC_015578:1633393:1640313164031316423162004Treponema primitia ZAS-2 chromosome, complete genomecitrate lyase ligase C- domain-containing protein1e-36154
NC_015578:1633393:1642333164233316443422010Treponema primitia ZAS-2 chromosome, complete genomecitrate lyase ligase C- domain-containing protein2e-36153
NC_015578:1633393:1644359164435916464012043Treponema primitia ZAS-2 chromosome, complete genomecitrate lyase ligase C- domain-containing protein1e-33144
NC_015578:1633393:1646418164641816484542037Treponema primitia ZAS-2 chromosome, complete genomecitrate lyase ligase C- domain-containing protein1e-32140