Pre_GI: BLASTP Hits

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Query: NC_004668:241352:255521 Enterococcus faecalis V583, complete genome

Start: 255521, End: 255608, Length: 88

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007576:435713:45183045183045191788Lactobacillus sakei subsp. sakei 23K, complete genometRNA-Ser6e-0856.2
NC_007929:473500:48660848660848669588Lactobacillus salivarius subsp. salivarius UCC118, complete genometRNA-Ser2e-0754.7
NC_008525:664500:67819967819967828688Pediococcus pentosaceus ATCC 25745, complete genometRNA-Ser2e-0754.3
NC_004193:375416:66229566229566238591Oceanobacillus iheyensis HTE831, complete genometRNA-Ser5e-0753.1
NC_014376:6296:17949179491803688Clostridium saccharolyticum WM1 chromosome, complete genometRNA-Ser1e-0652
NC_014334:769205:78155678155678164388Lactobacillus casei str. Zhang chromosome, complete genometRNA-Ser2e-0651.6
NC_008526:817628:83005283005283013988Lactobacillus casei ATCC 334, complete genometRNA-Ser2e-0651.6
NC_015697:1814128:18278791827879182796688Lactobacillus reuteri SD2112 chromosome, complete genometRNA-Ser2e-0650.8
NC_009513:618000:63084863084863093588Lactobacillus reuteri F275, complete genometRNA-Ser2e-0650.8
NC_010001:1:15146151461523388Clostridium phytofermentans ISDg, complete genometRNA-Ser3e-0650.4
NC_015428:700479:71272071272071280788Lactobacillus buchneri NRRL B-30929 chromosome, complete genometRNA-Ser6e-0649.7
NC_008497:1111891:11420831142083114217088Lactobacillus brevis ATCC 367, complete genometRNA-Ser6e-0649.7
NC_009089:117980:13026613026613035388Clostridium difficile 630, complete genometRNA-Ser9e-0648.9