Pre_GI: BLASTP Hits

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Query: NC_004663:4977635:4995518 Bacteroides thetaiotaomicron VPI-5482, complete genome

Start: 4995518, End: 4995763, Length: 246

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014933:270000:270003270003270251249Bacteroides helcogenes P 36-108 chromosome, complete genomeRNP-1 like RNA-binding protein8e-24108
NC_009614:769851:774049774049774294246Bacteroides vulgatus ATCC 8482 chromosome, complete genomeRNA-binding protein1e-21101
NC_015160:797780:819254819254819574321Odoribacter splanchnicus DSM 20712 chromosome, complete genomeRNP-1 like RNA-binding protein4e-1890.1
NC_011565:750168:766157766157766453297Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,putative RNA-binding protein RbpA5e-1889.7
NC_009926:34848:547435474355012270Acaryochloris marina MBIC11017 plasmid pREB1, complete sequenceRNA-binding protein8e-1889
NC_009615:1067603:108293710829371083308372Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA-binding protein rbpA9e-1889
NC_016609:1774259:179323217932321793540309Niastella koreensis GR20-10 chromosome, complete genomeRNP-1 like RNA-binding protein4e-1786.7
NC_016940:822892:838651838651839019369Saprospira grandis str. Lewin chromosome, complete genomernp-1 like RNA-binding protein3e-1684
NC_019940:1670262:167910616791061679378273Thioflavicoccus mobilis 8321 chromosome, complete genomeRRM domain-containing RNA-binding protein2e-1684
NC_007908:4677856:470154547015454701967423Rhodoferax ferrireducens T118, complete genomeRNA-binding region RNP-14e-1683.2
NC_008758:143907:143907143907144353447Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeRNP-1 like RNA-binding protein1e-1582
NC_016609:6361862:636296263629626363330369Niastella koreensis GR20-10 chromosome, complete genomeRNP-1 like RNA-binding protein2e-1581.3
NC_016609:4331359:433744243374424337756315Niastella koreensis GR20-10 chromosome, complete genomeRNP-1 like RNA-binding protein4e-1580.1
NC_007519:791679:814098814098814361264Desulfovibrio alaskensis G20 chromosome, complete genomeRNA-binding region RNP-12e-1478.2
NC_013446:2961647:299515729951572995498342Comamonas testosteroni CNB-2, complete genomeRNA-binding region RNP-16e-1476.3
NC_019757:5852000:585465358546535854967315Cylindrospermum stagnale PCC 7417, complete genomeRRM domain-containing RNA-binding protein9e-1475.5
NC_009446:473960:488098488098488385288Dichelobacter nodosus VCS1703A, complete genomeRNA recognition motif-containing protein9e-1475.5
NC_008782:3110744:313025631302563130564309Acidovorax sp. JS42, complete genomeRNP-1 like RNA-binding protein3e-1373.9
NC_008752:2334511:235390523539052354255351Acidovorax avenae subsp. citrulli AAC00-1, complete genomeRNP-1-like RNA-binding protein3e-1373.9
NC_018515:4196409:420031842003184200569252Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeRRM domain-containing RNA-binding protein4e-1373.6
NC_014962:3440826:344226134422613442575315Isosphaera pallida ATCC 43644 chromosome, complete genomeRNP-1 like RNA-binding protein6e-1372.8
NC_014541:2510819:252026925202692520541273Ferrimonas balearica DSM 9799 chromosome, complete genomeRNP-1 like RNA-binding protein2e-1270.9
NC_014844:903877:921691921691921954264Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRNP-1 like RNA-binding protein4e-1270.1
NC_005070:1331741:135243413524341352691258Synechococcus sp. WH 8102, complete genomeRNA-binding protein5e-1269.7
NC_016629:1175828:118202811820281182330303Desulfovibrio africanus str. Walvis Bay chromosome, completeRNP-1 like RNA-binding protein4e-1166.6
NC_007513:942500:961977961977962222246Synechococcus sp. CC9902, complete genomeRNA-binding region RNP-12e-1064.3
NC_011184:2723000:273966127396612740143483Vibrio fischeri MJ11 chromosome I, complete sequenceRNA-binding protein2e-0651.6
NC_005070:2133380:215362121536212154055435Synechococcus sp. WH 8102, complete genomeputative RNA-binding protein (RRM domain)5e-0649.7