Pre_GI: BLASTP Hits

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Query: NC_004663:4273143:4274459 Bacteroides thetaiotaomicron VPI-5482, complete genome

Start: 4274459, End: 4275403, Length: 945

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:604842:629051629051630022972Clostridium botulinum BKT015925 chromosome, complete genomedihydrouridine synthase, DuS9e-52204
NC_015977:442493:473123473123474070948Roseburia hominis A2-183 chromosome, complete genomedihydrouridine synthase9e-43174
NC_012778:364728:3800303800303810311002Eubacterium eligens ATCC 27750, complete genometRNA-dihydrouridine synthase C6e-36151
NC_015554:4724245:474773247477324748730999Alteromonas sp. SN2 chromosome, complete genometRNA-dihydrouridine synthase B6e-21101
NC_015949:71474:912649126492250987Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeTIM-barrel protein, nifR3 family2e-1997.1
NC_012416:4973:293392933930301963Wolbachia sp. wRi, complete genomeNifR3 family protein4e-1892.4
NC_014632:402500:402591402591403526936Ilyobacter polytropus DSM 2926 chromosome, complete genomenifR3 family TIM-barrel protein5e-1892
NC_002978:4973:292132921330175963Wolbachia endosymbiont of Drosophila melanogaster, complete genomeNifR3 family protein5e-1892
NC_002932:1798869:1823480182348018245381059Chlorobium tepidum TLS, complete genomeTIM-barrel protein, NifR3 family4e-1892
NC_018867:361423:363127363127364104978Dehalobacter sp. CF chromosome, complete genometRNA dihydrouridine synthase B6e-1891.7
NC_019903:83857:927869278693751966Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,tRNA-U20-dihydrouridine synthase9e-1891.3
NC_010718:128423:129394129394130377984Natranaerobius thermophilus JW/NM-WN-LF, complete genomeTIM-barrel protein, nifR3 family1e-1790.9
NC_008782:3361850:3377434337743433784621029Acidovorax sp. JS42, complete genomedihydrouridine synthase, DuS1e-1790.9
NC_011753:3088952:310623731062373107214978Vibrio splendidus LGP32 chromosome 1, complete genometRNA-dihydrouridine synthase B1e-1790.5
NC_007798:301456:306962306962307957996Neorickettsia sennetsu str. Miyayama, complete genomeputative tRNA-dihydrouridine synthase2e-1790.1
NC_007907:225948:233200233200234180981Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1789.7
NC_005070:617448:6409276409276419281002Synechococcus sp. WH 8102, complete genomeputative nitrogen regulation protein NifR3 family homolog3e-1789.4
NC_003454:1346500:134656813465681347491924Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNitrogen regulation protein NIFR33e-1789.4
NC_019892:7822000:7869291786929178703671077Singulisphaera acidiphila DSM 18658 chromosome, complete genomeTIM-barrel protein, nifR3 family7e-1788.2
NC_018664:2459994:247820724782072479175969Clostridium acidurici 9a chromosome, complete genometRNA-dihydrouridine synthase B2e-1687
NC_007513:632884:6554266554266564961071Synechococcus sp. CC9902, complete genomeDihydrouridine synthase TIM-barrel protein nifR32e-1686.7
NC_009922:490500:502960502960503934975Alkaliphilus oremlandii OhILAs, complete genomeputative TIM-barrel protein, nifR3 family3e-1686.3
NC_010475:953618:9711229711229721831062Synechococcus sp. PCC 7002, complete genomeDihydrouridine synthase (Dus)3e-1685.9
NC_003901:1568000:160671416067141607685972Methanosarcina mazei Go1, complete genomeNifR3-like protein5e-1685.5
NC_003030:3324834:334410733441073345072966Clostridium acetobutylicum ATCC 824, complete genomeNifR3 family enzyme4e-1685.5
NC_015687:3326461:334573333457333346698966Clostridium acetobutylicum DSM 1731 chromosome, complete genomeNifR3 family protein4e-1685.5
NC_016584:85543:902889028891253966Desulfosporosinus orientis DSM 765 chromosome, complete genomeTIM-barrel protein, nifR3 family6e-1685.1
NC_014541:475350:498726498726499691966Ferrimonas balearica DSM 9799 chromosome, complete genometRNA-U20-dihydrouridine synthase7e-1684.7
NC_017518:1449923:1474130147413014751401011Neisseria meningitidis NZ-05/33 chromosome, complete genomedihydrouridine synthase7e-1684.7
NC_009443:1860390:1874722187472218757561035Streptococcus suis 98HAH33, complete genometRNA-dihydrouridine synthase7e-1684.7
NC_009442:1865244:1875348187534818763821035Streptococcus suis 05ZYH33 chromosome, complete genometRNA-dihydrouridine synthase7e-1684.7
NC_012926:1910882:1925244192524419262481005Streptococcus suis BM407 chromosome, complete genometRNA-dihydrouridine synthase8e-1684.7
NC_012924:1860631:1874993187499318759971005Streptococcus suis SC84, complete genometRNA-dihydrouridine synthase8e-1684.7
NC_012925:1776450:1786584178658417875881005Streptococcus suis P1/7, complete genometRNA-dihydrouridine synthase8e-1684.7
NC_009454:259022:259789259789260763975Pelotomaculum thermopropionicum SI, complete genometRNA-dihydrouridine synthase9e-1684.3
NC_012673:1600242:161494816149481615943996Exiguobacterium sp. AT1b, complete genomeTIM-barrel protein, nifR3 family1e-1584
NC_014654:2138794:215474221547422155725984Halanaerobium sp. 'sapolanicus' chromosome, complete genomeTIM-barrel protein, nifR3 family1e-1584
NC_007516:1847745:1846747184674718477481002Synechococcus sp. CC9605, complete genomeDihydrouridine synthase TIM-barrel protein nifR31e-1584
NC_021150:3505234:350523435052343506214981Azotobacter vinelandii CA6, complete genometRNA-dihydrouridine synthase C2e-1583.6
NC_012560:3505235:350523535052353506215981Azotobacter vinelandii DJ, complete genometRNA-dihydrouridine synthase C2e-1583.6
NC_007503:2098980:212359621235962124561966Carboxydothermus hydrogenoformans Z-2901, complete genomeputative TIM-barrel protein, NifR3 family2e-1583.6
NC_015565:173774:176905176905177876972Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTIM-barrel protein, nifR3 family2e-1583.6
NC_013928:174500:179337179337180314978Streptococcus mutans NN2025, complete genomehypothetical protein3e-1582.8
NC_012039:185607:185607185607186533927Campylobacter lari RM2100, complete genometRNA-dihydrouridine synthase B3e-1582.8
NC_013016:1289975:1311613131161313127371125Neisseria meningitidis alpha14 chromosome, complete genomeputative tRNA-dihydrouridine synthase3e-1582.4
NC_010067:4149298:416627241662724167237966Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1582
NC_008767:1321129:1344689134468913456991011Neisseria meningitidis FAM18, complete genomehypothetical protein4e-1582
NC_017513:1331623:1359802135980213608121011Neisseria meningitidis G2136 chromosome, complete genomedihydrouridine synthase4e-1582
NC_014219:83888:856938569386691999Bacillus selenitireducens MLS10 chromosome, complete genomeTIM-barrel protein, nifR3 family6e-1581.6
NC_008262:2649289:268753626875362688516981Clostridium perfringens SM101, complete genomeputative dihydrouridine synthase9e-1581.3
NC_011312:3060371:307745830774583078426969Aliivibrio salmonicida LFI1238 chromosome chromosome 1, completetRNA-dihydrouridine synthase B1e-1480.9
NC_003116:1518110:1538729153872915397391011Neisseria meningitidis Z2491, complete genomehypothetical protein1e-1480.9
NC_017505:1370128:1395902139590213970261125Neisseria meningitidis alpha710 chromosome, complete genomenifR3 protein2e-1480.5
NC_012563:4004709:403168040316804032651972Clostridium botulinum A2 str. Kyoto, complete genomedihydrouridine synthase1e-1480.5
NC_009495:3735703:376375637637563764727972Clostridium botulinum A str. ATCC 3502 chromosome, complete genomedihydrouridine synthase1e-1480.5
NC_009697:3711692:373974537397453740716972Clostridium botulinum A str. ATCC 19397 chromosome, completedihydrouridine synthase1e-1480.5
NC_009698:3609881:363685536368553637826972Clostridium botulinum A str. Hall chromosome, complete genomedihydrouridine synthase1e-1480.5
NC_010516:3807780:383476238347623835733972Clostridium botulinum B1 str. Okra, complete genomedihydrouridine synthase1e-1480.5
NC_009699:3839575:386654338665433867514972Clostridium botulinum F str. Langeland chromosome, complete genomedihydrouridine synthase1e-1480.5
NC_017297:3838189:386516538651653866136972Clostridium botulinum F str. 230613 chromosome, complete genomedihydrouridine synthase1e-1480.5
NC_015563:1595500:159812415981241599113990Delftia sp. Cs1-4 chromosome, complete genomedihydrouridine synthase DuS2e-1480.1
NC_020291:117983:139857139857140822966Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometRNA-dihydrouridine synthase B2e-1480.1
NC_010002:5752363:576824257682425769231990Delftia acidovorans SPH-1, complete genomedihydrouridine synthase DuS2e-1480.1
NC_011567:75306:8088480884819391056Anoxybacillus flavithermus WK1, complete genometRNA-dihydrouridine synthase2e-1479.7
NC_017187:422698:427051427051427980930Arcobacter butzleri ED-1, complete genometRNA-dihydrouridine synthase4e-1479
NC_009850:445000:449434449434450363930Arcobacter butzleri RM4018, complete genomeprobable tRNA-dihydrouridine synthase4e-1479
NC_004557:162670:167984167984168952969Clostridium tetani E88, complete genomenitrogen regulation protein nifR36e-1478.6
NC_009089:4140764:415482241548224155790969Clostridium difficile 630, complete genometRNA-dihydrouridine synthase5e-1478.6
NC_013316:4018451:403314440331444034112969Clostridium difficile R20291, complete genometRNA-dihydrouridine synthase5e-1478.6
NC_004668:241352:245217245217246215999Enterococcus faecalis V583, complete genomezinc-binding TIM-barrel protein, nifR3 family, putative5e-1478.6
NC_014410:2329838:2336619233661923376201002Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,TIM-barrel protein, nifR3 family5e-1478.6
NC_013199:2536705:2551987255198725529881002Lactobacillus rhamnosus Lc 705, complete genometRNA-dihydrouridine synthase 15e-1478.6
NC_016930:11721:125141251413509996Rickettsia philipii str. 364D chromosome, complete genometRNA-dihydrouridine synthase8e-1478.2
NC_016913:1134000:115505111550511156046996Rickettsia rickettsii str. Brazil chromosome, complete genometRNA-dihydrouridine synthase8e-1478.2
NC_017065:13188:131881318814183996Rickettsia slovaca str. D-CWPP chromosome, complete genomePutative dihydrouridine synthase Dus8e-1478.2
NC_016639:13188:131881318814183996Rickettsia slovaca 13-B chromosome, complete genomePutative dihydrouridine synthase Dus8e-1478.2
NC_010556:71776:794337943380431999Exiguobacterium sibiricum 255-15, complete genomeTIM-barrel protein, nifR3 family9e-1477.8
NC_021182:4602683:462410046241004625071972Clostridium pasteurianum BC1, complete genomeputative TIM-barrel protein, nifR3 family8e-1477.8
NC_017028:109811:129407129407130402996Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completePutative dihydrouridine synthase Dus1e-1377.4
NC_017316:203233:210181210181211179999Enterococcus faecalis OG1RF chromosome, complete genometRNA-dihydrouridine synthase1e-1377.4
NC_013222:817686:820124820124821116993Robiginitalea biformata HTCC2501, complete genomeputative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain2e-1377
NC_008526:2489196:2508003250800325090041002Lactobacillus casei ATCC 334, complete genometRNA-dihydrouridine synthase2e-1377
NC_017030:8667935:8695301869530186963141014Corallococcus coralloides DSM 2259 chromosome, complete genomeputative tRNA-dihydrouridine synthase2e-1376.6
NC_018665:71677:7934179341803451005Exiguobacterium antarcticum B7 chromosome, complete genometRNA-dihydrouridine synthase2e-1376.6
NC_007759:723675:731735731735732715981Syntrophus aciditrophicus SB, complete genometRNA-dihydrouridine synthase2e-1376.3
NC_015975:380500:383511383511384500990Lactobacillus ruminis ATCC 27782 chromosome, complete genometRNA-dihydrouridine synthase4e-1375.9
NC_017208:64500:791827918280180999Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeNif3 family protein3e-1375.9
NC_014328:4471995:449344644934464494408963Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative tRNA-dihydrouridine synthase3e-1375.9
NC_007929:1397989:141390214139021414894993Lactobacillus salivarius subsp. salivarius UCC118, complete genometRNA-dihydrouridine synthase5e-1375.5
NC_015224:1641819:164549116454911646423933Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,tRNA-dihydrouridine synthase C5e-1375.5
NC_008024:117241:1172411172411182901050Streptococcus pyogenes MGAS10750, complete genometRNA-dihydrouridine synthase5e-1375.5
NC_008800:3123495:313855131385513139489939Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,tRNA-dihydrouridine synthase C5e-1375.5
NC_014393:4541000:456059345605934561558966Clostridium cellulovorans 743B chromosome, complete genomeTIM-barrel protein, nifR3 family4e-1375.5
NC_014935:836868:850476850476851438963Nitratifractor saLSUginis DSM 16511 chromosome, complete genometim-barrel protein, nifr3 family6e-1375.1
NC_009513:303043:3084333084333094341002Lactobacillus reuteri F275, complete genomeputative TIM-barrel protein, nifR3 family6e-1375.1
NC_020134:134875:140266140266141240975Clostridium stercorarium subsp. stercorarium DSM 8532, completetRNA-dihydrouridine synthase 11e-1274.3
NC_012470:2021316:203960120396012040578978Streptococcus equi subsp. zooepidemicus, complete genometRNA-dihydrouridine synthase1e-1273.9
NC_010610:269380:2703502703502713511002Lactobacillus fermentum IFO 3956, complete genomehypothetical protein1e-1273.9
NC_008525:1493317:151001015100101511008999Pediococcus pentosaceus ATCC 25745, complete genometRNA-dihydrouridine synthase1e-1273.9
NC_010723:173280:187823187823188788966Clostridium botulinum E3 str. Alaska E43, complete genometRNA-dihydrouridine synthase B2e-1273.6
NC_015977:3324000:334226733422673343202936Roseburia hominis A2-183 chromosome, complete genometRNA-dihydrouridine synthase2e-1273.2
NC_013446:1173377:1175387117538711764301044Comamonas testosteroni CNB-2, complete genomedihydrouridine synthase, DuS3e-1273.2
NC_007614:109000:1365651365651375781014Nitrosospira multiformis ATCC 25196 chromosome 1, completeDihydrouridine synthase TIM-barrel protein nifR33e-1272.8
NC_014166:681290:687958687958688908951Arcobacter nitrofigilis DSM 7299 chromosome, complete genomedihydrouridine synthase3e-1272.8
NC_008593:153014:162795162795163760966Clostridium novyi NT, complete genomenifR3 family enzyme3e-1272.8
NC_017265:2940539:294389929438992944837939Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,tRNA-dihydrouridine synthase C5e-1272
NC_015425:163000:172843172843173805963Clostridium botulinum BKT015925 chromosome, complete genomeputative TIM-barrel protein, nifR3 family5e-1272
NC_008497:556365:5614865614865625081023Lactobacillus brevis ATCC 367, complete genometRNA-dihydrouridine synthase8e-1271.2
NC_014972:2089003:210580821058082106797990Desulfobulbus propionicus DSM 2032 chromosome, complete genometRNA-U20-dihydrouridine synthase8e-1271.2
NC_020156:1565500:158504115850411586033993Nonlabens dokdonensis DSW-6, complete genomeTRNA-dihydrouridine synthase8e-1271.2
NC_013851:949973:9557229557229567381017Allochromatium vinosum DSM 180 chromosome, complete genomeTIM-barrel protein, nifR3 family1e-1170.9
NC_015957:8816355:8832903883290388341231221Streptomyces violaceusniger Tu 4113 chromosome, complete genomeTIM-barrel protein, nifR3 family1e-1170.9
NC_011653:748844:771421771421772311891Thermosipho africanus TCF52B, complete genomeNifR3 family protein2e-1170.1
NC_011999:2023248:2032174203217420331781005Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein3e-1169.7
NC_014551:809025:825568825568826551984Bacillus amyloliquefaciens DSM 7, complete genometRNA-dihydrouridine synthase 24e-1168.9
NC_017188:753039:769578769578770561984Bacillus amyloliquefaciens TA208 chromosome, complete genometRNA-dihydrouridine synthase4e-1168.9
NC_014228:1336466:133901313390131339987975Xenorhabdus nematophila ATCC 19061, complete genometRNA-dihydrouridine synthase C7e-1168.2
NC_017095:166896:175498175498176424927Fervidobacterium pennivorans DSM 9078 chromosome, complete genometRNA-dihydrouridine synthase7e-1168.2
NC_009749:937412:946482946482947465984Francisella tularensis subsp. holarctica FTA, complete genomeNifR3/Smm1 family protein1e-1067.4
NC_007880:935670:944740944740945723984Francisella tularensis subsp. holarctica, complete genomeNif3 family protein1e-1067.4
NC_008369:939356:948425948425949408984Francisella tularensis subsp. holarctica OSU18, complete genomeprobable tRNA-dihydrouridine synthase1e-1067.4
NC_008245:529378:542100542100543083984Francisella tularensis subsp. tularensis FSC 198, complete genomeNif3 family protein1e-1067.4
NC_006570:529426:542148542148543131984Francisella tularensis subsp. tularensis Schu 4, complete genomeNif3 family protein1e-1067.4
NC_009257:963536:971027971027972010984Francisella tularensis subsp. tularensis WY96-3418 chromosome,tRNA-dihydrouridine synthase1e-1067.4
NC_016933:608889:618077618077619060984Francisella tularensis TIGB03 chromosome, complete genometRNA dihydrouridine synthase B1e-1067.4
NC_016937:529459:542170542170543153984Francisella tularensis subsp. tularensis TI0902 chromosome,tRNA dihydrouridine synthase B1e-1067.4
NC_016605:272231:279032279032280015984Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeTIM-barrel , nifR3 family protein2e-1067
NC_012121:139741:170502170502171497996Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative tRNA-dihydrouridine synthase 12e-1067
NC_016023:2163000:219439421943942195377984Bacillus coagulans 36D1 chromosome, complete genomedihydrouridine synthase DuS2e-1066.6
NC_015634:2445396:244539624453962446391996Bacillus coagulans 2-6 chromosome, complete genomedihydrouridine synthase DuS3e-1065.9
UCMB5137:409500:425306425306426292987Bacillus atrophaeus UCMB-5137histidine phosphokinase/phophatase, putative4e-1065.9
NC_016641:2618587:262475826247582625747990Paenibacillus terrae HPL-003 chromosome, complete genomeputative tRNA-dihydrouridine synthase5e-1065.5
NC_015921:757776:775234775234776226993Borrelia bissettii DN127 chromosome, complete genomedihydrouridine synthase family protein1e-0964.3
NC_017190:794820:811413811413812342930Bacillus amyloliquefaciens LL3 chromosome, complete genometRNA-dihydrouridine synthase 21e-0964.3
NC_017191:754453:771046771046771975930Bacillus amyloliquefaciens XH7 chromosome, complete genometRNA-dihydrouridine synthase1e-0964.3
NC_009848:720510:736808736808737782975Bacillus pumilus SAFR-032, complete genometRNA-dihydrouridine synthase2e-0963.2
NC_017512:1294970:131727513172751317979705Neisseria meningitidis WUE 2594, complete genome3e-0962.8
NC_015978:412856:4191244191244201521029Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeputative tRNA-dihydrouridine synthase 14e-0962.4
NC_007633:952728:968067968067968993927Mycoplasma capricolum subsp. capricolum ATCC 27343, completetRNA-dihydrouridine synthase6e-0961.6
NC_014751:946155:961508961508962482975Mycoplasma leachii PG50 chromosome, complete genomeTIM-barrel protein, nifR3 family8e-0961.6
NC_007164:453743:4560954560954572641170Corynebacterium jeikeium K411, complete genomehypothetical protein4e-0858.9
NC_014972:3227500:3229358322935832304011044Desulfobulbus propionicus DSM 2032 chromosome, complete genomedihydrouridine synthase DuS1e-0757.4
NC_008027:3953951:3968573396857339695741002Pseudomonas entomophila L48, complete genometRNA-dihydrouridine synthase A3e-0652.8