Pre_GI: BLASTP Hits

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Query: NC_004663:2935060:2939709 Bacteroides thetaiotaomicron VPI-5482, complete genome

Start: 2939709, End: 2940530, Length: 822

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016048:184500:212424212424213251828Oscillibacter valericigenes Sjm18-20, complete genomeputative DNA lyase1e-62239
NC_010001:4128034:414576741457674146588822Clostridium phytofermentans ISDg, complete genomeFormamidopyrimidine-DNA glycolase, H2TH DNA binding9e-55213
NC_007797:411630:427134427134427940807Anaplasma phagocytophilum HZ, complete genomeformamidopyrimidine-DNA glycosylase1e-1584
NC_021184:504728:514592514592515197606Desulfotomaculum gibsoniae DSM 7213, complete genomeformamidopyrimidine-DNA glycosylase5e-1478.6
NC_011080:3875320:389428238942823895091810Salmonella enterica subsp. enterica serovar Newport str. SL254,formamidopyrimidine-DNA glycosylase1e-1273.9
NC_009792:4658909:467562746756274676436810Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1273.6
NC_013716:4408201:440969244096924410501810Citrobacter rodentium ICC168, complete genomeformamidopyrimidine-DNA glycosylase2e-1273.2
NC_020063:97436:974369743698245810Enterobacteriaceae bacterium strain FGI 57, complete genomeformamidopyrimidine-DNA glycosylase Fpg2e-1273.2
NC_011205:3942500:396083239608323961641810Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853formamidopyrimidine-DNA glycosylase4e-1272.4
NC_003198:3924952:392635739263573927166810Salmonella enterica subsp. enterica serovar Typhi str. CT18,formamidopyrimidine-DNA glycosylase3e-1272.4
NC_006511:3690828:370979037097903710599810Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCformamidopyrimidine-DNA glycosylase3e-1272.4
NC_004631:3910451:391185639118563912665810Salmonella enterica subsp. enterica serovar Typhi Ty2, completeformamidopyrimidine-DNA glycosylase3e-1272.4
NC_011094:3778000:379721737972173798026810Salmonella enterica subsp. enterica serovar Schwarzengrund strformamidopyrimidine-DNA glycosylase3e-1272.4
NC_011147:3686500:370546737054673706276810Salmonella enterica subsp. enterica serovar Paratyphi A strformamidopyrimidine-DNA glycosylase3e-1272.4
NC_011274:3894387:389579238957923896601810Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91formamidopyrimidine-DNA glycosylase3e-1272.4
NC_011294:3782655:380223538022353803044810Salmonella enterica subsp. enterica serovar Enteritidis strformamidopyrimidine-DNA glycosylase3e-1272.4
NC_016831:3875134:387653938765393877348810Salmonella enterica subsp. enterica serovar Gallinarum/pullorumformamidopyrimidine-DNA glycosylase3e-1272.4
NC_016832:3900000:390065339006533901462810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Formamidopyrimidine-DNA glycosylase3e-1272.4
NC_003197:3902500:392113139211313921940810Salmonella typhimurium LT2, complete genomeformamidopyrimidine-DNA glycosylase4e-1272
NC_011083:3915500:393414139341413934950810Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,formamidopyrimidine-DNA glycosylase4e-1272
NC_016810:3923988:394244539424453943254810Salmonella enterica subsp. enterica serovar Typhimurium strformamidopyrimidine-DNA glycosylase4e-1272
NC_016856:3916500:393482339348233935632810Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sformamidopyrimidine-DNA glycosylase4e-1272
NC_016857:3924000:394244639424463943255810Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74formamidopyrimidine-DNA glycosylase4e-1272
NC_016860:3925500:394402739440273944836810Salmonella enterica subsp. enterica serovar Typhimurium strformamidopyrimidine-DNA glycosylase4e-1272
NC_016863:3864000:388243038824303883239810Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1formamidopyrimidine-DNA glycosylase4e-1272
NC_017046:3923000:394127239412723942081810Salmonella enterica subsp. enterica serovar Typhimurium str. 798formamidopyrimidine-DNA glycosylase4e-1272
NC_011149:3822000:384049838404983841307810Salmonella enterica subsp. enterica serovar Agona str. SL483,formamidopyrimidine-DNA glycosylase5e-1271.6
NC_012125:3840000:385828638582863859095810Salmonella enterica subsp. enterica serovar Paratyphi C strainformamidopyrimidine-DNA glycosylase8e-1271.2
NC_002655:4606000:462318546231854623994810Escherichia coli O157:H7 EDL933, complete genomeformamidopyrimidine-DNA glycosylase7e-1271.2
NC_010067:3846962:384722738472273848036810Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-1271.2
NC_012967:3729813:374869837486983749507810Escherichia coli B str. REL606 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
NC_012947:94930:949309493095739810Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeformamidopyrimidine-DNA glycosylase1e-1170.9
NC_012759:3675396:369669236966923697501810Escherichia coli BW2952 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
AC_000091:3827856:382926338292633830072810Escherichia coli W3110 DNA, complete genomeformamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase1e-1170.9
NC_000913:3786124:380836638083663809175810Escherichia coli K12, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
NC_010473:3883701:390594339059433906752810Escherichia coli str. K-12 substr. DH10B, complete genomeformamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase1e-1170.9
NC_009800:3821824:383992438399243840733810Escherichia coli HS, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
NC_011750:4307166:432526343252634326072810Escherichia coli IAI39 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
AP010958:4668181:466958846695884670397810Escherichia coli O103:H2 str. 12009 DNA, complete genomeformamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase1e-1170.9
CP002516:88500:890528905289861810Escherichia coli KO11, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
NC_013850:109500:128612128612129421810Klebsiella variicola At-22 chromosome, complete genomeformamidopyrimidine-DNA glycosylase9e-1270.9
NC_011283:105245:123416123416124225810Klebsiella pneumoniae 342 chromosome, complete genomeformamidopyrimidine-DNA glycosylase9e-1270.9
NC_007606:3784847:380261238026123803421810Shigella dysenteriae Sd197, complete genomeformamidopyrimidine DNA glycosylase9e-1270.9
NC_016902:88500:890528905289861810Escherichia coli KO11FL chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
NC_013353:4668181:466958846695884670397810Escherichia coli O103:H2 str. 12009, complete genomeformamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase1e-1170.9
NC_011748:4167043:418536541853654186174810Escherichia coli 55989, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.9
CU928145:4167043:418536541853654186174810Escherichia coli 55989 chromosome, complete genomeformamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase1e-1170.9
CP002185:3998112:401621240162124017021810Escherichia coli W, complete genomeformamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase1e-1170.9
NC_004337:3590323:378065737806573781466810Shigella flexneri 2a str. 301, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
CU928160:3862935:388102638810263881835810Escherichia coli IAI1 chromosome, complete genomeformamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase1e-1170.5
NC_007946:4050762:406887140688714069680810Escherichia coli UTI89, complete genomeformamidopyrimidine DNA glycosylase1e-1170.5
NC_008258:3995553:399692139969213997730810Shigella flexneri 5 str. 8401, complete genomeformamidopyrimidine DNA glycosylase1e-1170.5
NC_010658:3774110:379316537931653793974810Shigella boydii CDC 3083-94, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011740:4007000:402705440270544027863810Escherichia fergusonii ATCC 35469, complete genomeformamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase1e-1170.5
NC_002695:4537000:455420245542024555011810Escherichia coli O157:H7 str. Sakai, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_007613:3637832:365594136559413656750810Shigella boydii Sb227, complete genomeformamidopyrimidine DNA glycosylase1e-1170.5
NC_010498:4031500:404836440483644049173810Escherichia coli SMS-3-5, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_010468:80000:806238062381432810Escherichia coli ATCC 8739, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_007384:3956465:395673039567303957539810Shigella sonnei Ss046, complete genomeformamidopyrimidine DNA glycosylase1e-1170.5
NC_009801:4108179:412627941262794127088810Escherichia coli E24377A, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_008253:3896704:391481339148133915622810Escherichia coli 536, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_004337:3761865:378065737806573781466810Shigella flexneri 2a str. 301, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_008563:4083558:410166741016674102476810Escherichia coli APEC O1, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_004741:3992384:399379139937913994600810Shigella flexneri 2a str. 2457T, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_017328:3794105:381285738128573813666810Shigella flexneri 2002017 chromosome, complete genomeFormamidopyrimidine-DNA glycosylase1e-1170.5
NC_016822:4093000:409359040935904094399810Shigella sonnei 53G, complete genomeformamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase1e-1170.5
NC_013941:4427000:444414744441474444956810Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeformamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic site) lyase mutM)1e-1170.5
NC_013364:4460500:447774444777444478553810Escherichia coli O111:H- str. 11128, complete genomeformamidopyrimidine/5-formyluracil/5- hydroxymethyluracil DNA glycosylase1e-1170.5
NC_013361:4991020:499242749924274993236810Escherichia coli O26:H11 str. 11368 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_013008:4595043:461334746133474614156810Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011745:4226186:424450742445074245316810Escherichia coli ED1a chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011742:3998285:401639440163944017203810Escherichia coli S88 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011741:3862935:388102638810263881835810Escherichia coli IAI1 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011601:4036590:405671340567134057522810Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011415:4040211:405853340585334059342810Escherichia coli SE11 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011353:4639002:465730646573064658115810Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_011751:4251296:426962142696214270430810Escherichia coli UMN026 chromosome, complete genomeformamidopyrimidine-DNA glycosylase1e-1170.5
NC_010102:3851500:387007838700783870887810Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1170.1
NC_004431:4223232:424134142413414242150810Escherichia coli CFT073, complete genomeformamidopyrimidine-DNA glycosylase2e-1169.7
NC_015761:3611993:363097136309713631780810Salmonella bongori NCTC 12419, complete genomeformamidopyrimidine-DNA glycosylase2e-1169.7
NC_011901:342777:360929360929361744816Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDNA-formamidopyrimidine glycosylase2e-1169.7
NC_006905:3845000:386343138634313864240810Salmonella enterica subsp. enterica serovar Choleraesuis strformamidopyrimidine-DNA glycosylase3e-1169.3
NC_011145:306623:326034326034326876843Anaeromyxobacter sp. K, complete genomeDNA-(apurinic or apyrimidinic site) lyase3e-1168.9
NC_016023:2163000:219299521929952193798804Bacillus coagulans 36D1 chromosome, complete genomeFormamidopyrimidine-DNA glycosylase catalytic domain-containing protein7e-1064.7
NC_011891:315182:334540334540335382843Anaeromyxobacter dehalogenans 2CP-1, complete genomeformamidopyrimidine-DNA glycosylase8e-1064.3
NC_017303:1454841:146624914662491467106858Corynebacterium pseudotuberculosis I19 chromosome, complete genomeFormamidopyrimidine-DNA glycosylase8e-1064.3
NC_011772:4487378:451608545160854516915831Bacillus cereus G9842, complete genomeformamidopyrimidine-DNA glycosylase1e-0963.9
NC_010718:1959517:198209919820991982986888Natranaerobius thermophilus JW/NM-WN-LF, complete genomeformamidopyrimidine-DNA glycosylase2e-0962.8
NC_006526:1202000:120865712086571209469813Zymomonas mobilis subsp. mobilis ZM4, complete genomeformamidopyrimidine-DNA glycosylase5e-0961.6
NC_004829:312750:331472331472332299828Mycoplasma gallisepticum R, complete genomeformamidopyrimidine-DNA glycosylase8e-0961.2
NC_014355:781537:795929795929796792864Candidatus Nitrospira defluvii, complete genomebifunctional DNA-formamidopyrimidine glycosylase/DNA lyase7e-0961.2
NC_016816:127802:147796147796148605810Pantoea ananatis LMG 5342, complete genomeFormamidopyrimidine-DNA glycosylase2e-0860.1
NC_012913:2189862:219462421946242195439816Aggregatibacter aphrophilus NJ8700, complete genomeheptosyltransferase family2e-0859.7
NC_013416:386301:397673397673398530858Aggregatibacter actinomycetemcomitans D11S-1, complete genomeheptosyltransferase family3e-0859.3
NC_016513:689689:701062701062701919858Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeformamidopyrimidine-DNA glycosyllase3e-0859.3
NC_017317:1598925:160851416085141609371858Corynebacterium ulcerans 809 chromosome, complete genomeFormamidopyrimidine-DNA glycosylase3e-0859.3
NC_015722:209722:230082230082230891810Candidatus Midichloria mitochondrii IricVA chromosome, completeformamidopyrimidine-DNA glycosylase2e-0859.3
NC_015717:4736500:475363647536364754514879Hyphomicrobium sp. MC1, complete genomeformamidopyrimidine-DNA glycosylase4e-0858.9
NC_018691:198909:226189226189226998810Alcanivorax dieselolei B5 chromosome, complete genomeFormamidopyrimidine-DNA glycosylase 24e-0858.9
NC_016745:675909:678543678543679355813Oceanimonas sp. GK1 chromosome, complete genomeformamidopyrimidine-DNA glycosylase4e-0858.5
NC_014221:266638:269038269038269841804Truepera radiovictrix DSM 17093 chromosome, complete genomeformamidopyrimidine-DNA glycosylase8e-0857.8
NC_018145:147759:158220158220159032813Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeformamidopyrimidine-DNA glycosylase8e-0857.8
NC_013421:4790696:481053948105394811348810Pectobacterium wasabiae WPP163, complete genomeformamidopyrimidine-DNA glycosylase9e-0857.4
NC_007513:1764739:177004717700471770883837Synechococcus sp. CC9902, complete genomeFormamidopyrimidine-DNA glycolase1e-0757.4
NC_004547:164000:168516168516169325810Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeformamidopyrimidine-DNA glycosylase3e-0755.8
NC_007912:4661141:466402046640204664835816Saccharophagus degradans 2-40, complete genomePseudouridine synthase, Rsu8e-0754.7
NC_014501:5419958:542337554233755424208834Cyanothece sp. PCC 7822 chromosome, complete genomeformamidopyrimidine-DNA glycosylase6e-0651.6