Pre_GI: BLASTP Hits

Some Help

Query: NC_004663:2509433:2544396 Bacteroides thetaiotaomicron VPI-5482, complete genome

Start: 2544396, End: 2544833, Length: 438

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014933:510164:560362560362560802441Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-37154
NC_009614:3385187:339374133937413394190450Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-36150
NC_016776:2956444:299380429938042994247444Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-35148
NC_006347:3166000:318371231837123184185474Bacteroides fragilis YCH46, complete genomeN-acetylmuramoyl-L-alanine amidase2e-34144
NC_016776:3258939:328244832824483282897450Bacteroides fragilis 638R, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-34143
NC_003228:3212500:324505032450503245499450Bacteroides fragilis NCTC 9343, complete genomeputative N-acetylmuramoyl-L-alanine amidase3e-34143
NC_002940:78392:820238202382544522Haemophilus ducreyi 35000HP, complete genomepossible N-acetylmuramoyl-L-alanine amidase1e-31134
NC_009937:4122652:413172941317294132214486Azorhizobium caulinodans ORS 571, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-30131
NC_009615:644757:650831650831651277447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-30131
NC_009615:1849237:186592118659211866367447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-30131
NC_009614:3748950:375560737556073756125519Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-27122
NC_009615:322107:326278326278326724447Parabacteroides distasonis ATCC 8503 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-27121
NC_009614:3081190:309159730915973092115519Bacteroides vulgatus ATCC 8482 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase9e-27118
NC_004663:2014035:203165820316582032071414Bacteroides thetaiotaomicron VPI-5482, complete genomeN-acetylmuramoyl-L-alanine amidase2e-26117
NC_020125:194691:201926201926202375450Riemerella anatipestifer RA-CH-2, complete genomeNegative regulator of beta-lactamase expression3e-26117
NC_002947:2589951:259108225910822591531450Pseudomonas putida KT2440, complete genomeN-acetylmuramoyl-L-alanine amidase, putative5e-24109
NC_014933:2397518:240412324041232404617495Bacteroides helcogenes P 36-108 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-23108
NC_009511:4882047:491115849111584911598441Sphingomonas wittichii RW1 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-2098.6
NC_014033:1062935:107469210746921075111420Prevotella ruminicola 23 chromosome, complete genomeprophage PRU01 N-acetylmuramoyl-L-alanine amidase5e-2096.3
NC_015177:1131173:114429711442971145226930Pedobacter saltans DSM 12145 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 22e-1891.3
NC_000907:1568867:157016615701661570441276Haemophilus influenzae Rd KW20, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1581.3
NC_014033:103020:134208134208134651444Prevotella ruminicola 23 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1478.6
NC_014657:914071:932635932635933078444Caldicellulosiruptor owensensis OL chromosome, complete genomen-acetylmuramoyl-l-alanine amidase family 21e-1478.6
NC_015160:937317:954145954145954609465Odoribacter splanchnicus DSM 20712 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 23e-1477
NC_013132:327743:331484331484331894411Chitinophaga pinensis DSM 2588, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD1e-1375.1
NC_014034:995661:101142410114241012062639Rhodobacter capsulatus SB1003 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1270.5
NC_017200:1137639:115469711546971155425729Bacillus thuringiensis serovar finitimus YBT-020 chromosome,N-acetylmuramoyl-L-alanine amidase fused to LysM and peptidoglycan binding domain8e-1165.9
NC_017297:3428429:342931934293193430221903Clostridium botulinum F str. 230613 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-1065.5
NC_009699:3429817:343070734307073431609903Clostridium botulinum F str. Langeland chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1065.5
NC_017068:1216548:1231445123144512326561212Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage N-acetylmuramoyl-L-alanine amidase1e-0858.9
NC_012491:3704000:371675937167593717571813Brevibacillus brevis NBRC 100599, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-0858.2