Query: NC_004632:28470 Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,
Start: 28470, End: 51864, Length: 23395
Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_007275:1 | 1 | 21125 | 21125 | Pseudomonas syringae pv. phaseolicola 1448A small plasmid, complete | 0 | 5063 | BLASTN svg | BLASTP svg |
NC_004578:5336773* | 5336773 | 5416608 | 79836 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3891 | BLASTN svg | BLASTP svg |
NC_004578:20738 | 20738 | 69606 | 48869 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3891 | BLASTN svg | BLASTP svg |
NC_004578:1190000* | 1190000 | 1219450 | 29451 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3891 | BLASTN svg | BLASTP svg |
NC_004578:2560473 | 2560473 | 2588812 | 28340 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:3849835 | 3849835 | 3872607 | 22773 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:4061372 | 4061372 | 4093997 | 32626 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:4781326 | 4781326 | 4816423 | 35098 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:6334735 | 6334735 | 6363979 | 29245 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:895019* | 895019 | 921692 | 26674 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:934867 | 934867 | 964069 | 29203 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:212468 | 212468 | 242099 | 29632 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3889 | BLASTN svg | BLASTP svg |
NC_004578:5192110 | 5192110 | 5222459 | 30350 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 3794 | BLASTN svg | BLASTP svg |
NC_004578:6089958 | 6089958 | 6122366 | 32409 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 0 | 2817 | BLASTN svg | BLASTP svg |
NC_005773:5149768* | 5149768 | 5211416 | 61649 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 0 | 827 | BLASTN svg | BLASTP svg |
NC_005773:1135374 | 1135374 | 1174815 | 39442 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 4e-153 | 549 | BLASTN svg | BLASTP svg |
NC_005773:4282840* | 4282840 | 4314121 | 31282 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 1e-116 | 428 | BLASTN svg | BLASTP svg |
NC_012560:3698697 | 3698697 | 3721523 | 22827 | Azotobacter vinelandii DJ, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_012560:5019900* | 5019900 | 5051620 | 31721 | Azotobacter vinelandii DJ, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_012560:898416* | 898416 | 925583 | 27168 | Azotobacter vinelandii DJ, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_021150:3698696 | 3698696 | 3721522 | 22827 | Azotobacter vinelandii CA6, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_021150:5019887* | 5019887 | 5051607 | 31721 | Azotobacter vinelandii CA6, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_021150:898428* | 898428 | 925595 | 27168 | Azotobacter vinelandii CA6, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015222:3137167 | 3137167 | 3158619 | 21453 | Nitrosomonas sp. AL212 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015222:1905194* | 1905194 | 1929079 | 23886 | Nitrosomonas sp. AL212 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |