Pre_GI: BLASTP Hits

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Query: NC_004632:28470:48735 Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,

Start: 48735, End: 49793, Length: 1059

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012751:942315:9586299586299596331005Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeTraN conjugal transfer protein3e-74279
NC_010117:1633447:1655408165540816564451038Coxiella burnetii RSA 331, complete genomeIcmK protein4e-27122
NC_011528:1769349:1791385179138517924401056Coxiella burnetii CbuK_Q154, complete genomeIcmK2e-26120