Pre_GI: BLASTP Hits

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Query: NC_004632:28470:38100 Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,

Start: 38100, End: 38552, Length: 453

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012751:942315:950762950762951226465Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilT lytic transglycosylase, SLT domain protein3e-39160
NC_012751:1296877:130924113092411309711471Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilT lytic transglycosylase, SLT domain protein3e-38157
NC_012214:3502992:351002935100293510526498Erwinia pyrifoliae Ep1/96, complete genomelytic transglycosylase8e-35145
NC_013008:3761467:377570337757033776206504Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelytic transglycosylase2e-28124
NC_011353:3805819:382097738209773821480504Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelytic transglycosylase PilT2e-28124
NC_002655:3769643:378388037838803784383504Escherichia coli O157:H7 EDL933, complete genomehypothetical protein2e-28124
NC_011751:3285646:330080633008063301309504Escherichia coli UMN026 chromosome, complete genomeputative peptidoglycan-binding-like protein5e-28123
NC_011750:3407500:342271734227173423220504Escherichia coli IAI39 chromosome, complete genomeputative peptidoglycan-binding-like protein8e-28122
NC_002695:3702344:371668237166823717083402Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-24109
NC_009800:2995958:301253530125353012969435Escherichia coli HS, complete genome7e-23106
NC_004547:611178:612883612883613401519Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein3e-22103
NC_016902:903241:921561921561922037477Escherichia coli KO11FL chromosome, complete genomelytic transglycosylase6e-22102
NC_011741:3030324:304524330452433045719477Escherichia coli IAI1 chromosome, complete genomeputative peptidoglycan-binding-like protein6e-22102
CP002516:903241:921561921561922037477Escherichia coli KO11, complete genomeLytic transglycosylase catalytic6e-22102
NC_011748:3196173:321109232110923211568477Escherichia coli 55989, complete genomeputative peptidoglycan-binding-like protein precursor6e-22102
CU928160:3030324:304524330452433045719477Escherichia coli IAI1 chromosome, complete genomeputative peptidoglycan-binding-like protein precursor6e-22102
CU928145:3196173:321109232110923211568477Escherichia coli 55989 chromosome, complete genomeputative peptidoglycan-binding-like protein precursor6e-22102
NC_009650:65732:717407174072225486Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN4,putative lytic transglycosylase1e-21102
NC_010468:906957:926054926054926428375Escherichia coli ATCC 8739, complete genomeLytic transglycosylase catalytic4e-2096.7
NC_011601:4096427:412856841285684129026459Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-1995.1
NC_013364:3701895:374620937462093746667459Escherichia coli O111:H- str. 11128, complete genomehypothetical protein2e-1994.7
NC_015761:2726000:274178827417882742270483Salmonella bongori NCTC 12419, complete genomecell invasion protein2e-1994.7
NC_010067:84093:924719247192953483Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1994
NC_011094:2913500:292874029287402929222483Salmonella enterica subsp. enterica serovar Schwarzengrund strinvasion protein IagB3e-1994
NC_017046:3027161:304285130428513043333483Salmonella enterica subsp. enterica serovar Typhimurium str. 798cell invasion protein6e-1993.2
NC_013941:4470932:450228845022884502764477Escherichia coli O55:H7 str. CB9615 chromosome, complete genometransglycosylase SLT domain protein5e-1993.2
NC_006905:2960260:297506329750632975545483Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein5e-1993.2
NC_011080:2982346:299803929980392998521483Salmonella enterica subsp. enterica serovar Newport str. SL254,cell invasion protein5e-1993.2
NC_010102:2967464:298451729845172984999483Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-1993.2
NC_016863:2974333:299002529900252990507483Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1invasion protein precursor6e-1993.2
NC_016860:3029272:304496530449653045447483Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein6e-1993.2
NC_016857:3028421:304411130441113044593483Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74invasion protein precursor6e-1993.2
NC_016856:3026426:304177230417723042254483Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sinvasion protein precursor6e-1993.2
NC_016810:3028421:304411130441113044593483Salmonella enterica subsp. enterica serovar Typhimurium strcell invasion protein6e-1993.2
NC_011149:2912219:293006129300612930543483Salmonella enterica subsp. enterica serovar Agona str. SL483,invasion protein IagB6e-1993.2
NC_011083:2980356:299604929960492996531483Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,invasion protein IagB6e-1993.2
NC_003197:3005842:302153530215353022017483Salmonella typhimurium LT2, complete genomeinvasion protein precursor6e-1993.2
NC_011205:3050235:306593230659323066414483Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cell invasion protein5e-1993.2
NC_011274:2881306:289699928969992897481483Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cell invasion protein5e-1993.2
NC_013364:3552284:356731135673113567685375Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-1993.2
NC_013361:3867558:388257938825793882953375Escherichia coli O26:H11 str. 11368 chromosome, complete genomepeptidoglycan-binding like protein precursor5e-1993.2
NC_013353:3474077:348909634890963489470375Escherichia coli O103:H2 str. 12009, complete genomepeptidoglycan-binding-like protein precursor5e-1993.2
AP010958:3474077:348909634890963489470375Escherichia coli O103:H2 str. 12009 DNA, complete genomepeptidoglycan-binding-like protein precursor5e-1993.2
NC_000913:2975659:299206329920632992437375Escherichia coli K12, complete genomepredicted peptidoglycan-binding enzyme (pseudogene)5e-1993.2
NC_010473:3069529:308593330859333086307375Escherichia coli str. K-12 substr. DH10B, complete genome5e-1993.2
AC_000091:2976293:299269729926972993071375Escherichia coli W3110 DNA, complete genome5e-1993.2
CP002185:3167738:318414131841413184515375Escherichia coli W, complete genomeputative lytic transglycosylase5e-1993.2
NC_011147:2814664:283161728316172832099483Salmonella enterica subsp. enterica serovar Paratyphi A strcell invasion protein5e-1993.2
NC_006511:2819128:283608128360812836563483Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCcell invasion protein5e-1993.2
NC_016831:2867766:288345828834582883940483Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcell invasion protein5e-1993.2
NC_012125:2938519:295544629554462955928483Salmonella enterica subsp. enterica serovar Paratyphi C straincell invasion protein5e-1993.2
NC_011294:2890500:290619529061952906677483Salmonella enterica subsp. enterica serovar Enteritidis strcell invasion protein5e-1993.2
NC_004631:2842453:285940228594022859884483Salmonella enterica subsp. enterica serovar Typhi Ty2, completecell invasion protein7e-1992.8
NC_003198:2856596:287354528735452874027483Salmonella enterica subsp. enterica serovar Typhi str. CT18,cell invasion protein7e-1992.8
NC_016832:2829767:284670128467012847183483Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-1992.8
NC_002655:4653160:468378546837854684243459Escherichia coli O157:H7 EDL933, complete genomehypothetical protein6e-1992.8
NC_002695:4584177:461480246148024615260459Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-1992.8
NC_011353:4688000:471790647179064718364459Escherichia coli O157:H7 str. EC4115 chromosome, complete genometransglycosylase SLT domain-containing protein6e-1992.8
NC_013008:4643825:467394746739474674405459Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelytic transglycosylase6e-1992.8
NC_002939:2315402:233949023394902339996507Geobacter sulfurreducens PCA, complete genometransglycosylase SLT domain protein2e-1891.3
NC_002939:2337402:233949023394902339996507Geobacter sulfurreducens PCA, complete genometransglycosylase SLT domain protein2e-1891.3
AP010958:3669500:370471537047153705173459Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-1889.7
NC_013353:3669500:370471537047153705173459Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-1889.7
NC_013361:5319497:533870853387085339166459Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein6e-1889.7
NC_014305:126029:131075131075131620546Erwinia billingiae Eb661 plasmid pEB170, complete sequenceLytic transglycosylase1e-1789
NC_015761:299386:329515329515330003489Salmonella bongori NCTC 12419, complete genomepilin-like protein2e-1787.8
NC_010699:1:209220922613522Erwinia tasmaniensis plasmid pET45, complete sequenceLytic Transglycosylase, may function in locally opening the peptidoglycan layer around the type IV transporter system1e-1685.1
NC_011035:829945:886459886459886920462Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein LtgX4e-1580.1
NC_008609:2254392:225747422574742258106633Pelobacter propionicus DSM 2379, complete genomeLytic transglycosylase, catalytic9e-1579
NC_014618:1040381:105109310510931051530438Enterobacter cloacae SCF1 chromosome, complete genomelytic transglycosylase3e-1477.4
NC_012856:2931995:293630529363052936778474Ralstonia pickettii 12D chromosome 1, complete genomeLytic transglycosylase catalytic4e-1373.6
NC_010606:25090:392353923539861627Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceSoluble lytic murein transglycosylase4e-1373.6
NC_015377:34445:437664376644227462Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencelytic transglycosylase, catalytic7e-1372.8
NC_013722:1689125:170856817085681709014447Xanthomonas albilineans, complete genomehypothetical protein2e-1271.2
NC_008757:111292:116229116229116765537Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeLytic transglycosylase, catalytic3e-1270.5
NC_012721:770651:8356118356118368131203Burkholderia glumae BGR1 chromosome 2, complete genomeLytic transglycosylase, catalytic4e-1167
NC_013961:851044:857417857417857920504Erwinia amylovora, complete genomeProtein ipgF precursor4e-1167
NC_017271:1517820:152209815220981522514417Xanthomonas campestris pv. raphani 756C chromosome, completelysozyme-related protein Hpa21e-1065.5
NC_007086:3582500:359634835963483596764417Xanthomonas campestris pv. campestris str. 8004, complete genomeHpa2 protein1e-1065.5
NC_003902:1442705:144701314470131447429417Xanthomonas campestris pv. campestris str. ATCC 33913, completeHpa2 protein1e-1065.5
NC_014762:1204584:122323212232321223654423Sulfuricurvum kujiense DSM 16994 chromosome, complete genomelytic transglycosylase catalytic2e-1065.1
NC_011415:3217796:323294032329403233191252Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-1064.7
NC_006349:1630514:165359716535971654160564Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceBapC protein2e-1064.3
NC_010688:3487000:350108835010883501660573Xanthomonas campestris pv. campestris, complete genomeputative type III secretion-system related transglycosylase3e-1064.3
NC_007508:479799:490947490947491420474Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transglycosylase HpaH4e-1063.9