Pre_GI: BLASTP Hits

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Query: NC_004631:948054:979751 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 979751, End: 980548, Length: 798

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:948029:977426977426978223798Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein9e-153539
NC_016831:947281:983279983279984076798Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-152536
NC_011294:2053991:205924020592402060037798Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-152536
NC_011205:2180598:218722721872272188024798Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-152536
NC_011274:2044000:205046420504642051261798Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-151535
NC_011149:1987291:199537619953761996173798Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-151533
NC_015761:1970042:198453019845301985327798Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-145515
NC_010067:892729:915404915404916159756Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-140498
NC_013716:2139952:216441421644142165211798Citrobacter rodentium ICC168, complete genomehypothetical protein1e-132472
NC_011740:1991941:200115220011522001949798Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-127455
NC_021066:601029:613239613239614036798Raoultella ornithinolytica B6, complete genomeDgsA anti-repressor MtfA3e-126451
NC_016822:2201388:222023722202372221034798Shigella sonnei 53G, complete genomeDgsA anti-repressor MtfA3e-126451
CP002516:1902431:190999619099961910793798Escherichia coli KO11, complete genomeprotein of unknown function DUF9802e-126451
CP002185:2181936:219506221950622195859798Escherichia coli W, complete genomeconserved protein2e-126451
CU928160:2091249:210535621053562106153798Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-126451
NC_011741:2091249:210535621053562106153798Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-126451
NC_016902:1902431:190999619099961910793798Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-126451
NC_012759:1920955:193415819341581934955798Escherichia coli BW2952 chromosome, complete genomehypothetical protein4e-126450
NC_010473:2119480:213268321326832133480798Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein4e-126450
AC_000091:2027648:204578820457882046585798Escherichia coli W3110 DNA, complete genomehypothetical protein4e-126450
NC_000913:2028472:204167520416752042472798Escherichia coli K12, complete genomehypothetical protein4e-126450
NC_004431:2185750:221698522169852217821837Escherichia coli CFT073, complete genomeHypothetical protein yeeI1e-125449
NC_012947:1769438:179021317902131791010798Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-125448
NC_012967:1967675:198165019816501982447798Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-125448
NC_008253:1938975:197018319701831970980798Escherichia coli 536, complete genomehypothetical protein YeeI3e-125447
NC_011601:2139188:213918821391882139985798Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein8e-125446
NC_016612:5208936:521995552199555220752798Klebsiella oxytoca KCTC 1686 chromosome, complete genomeDgsA anti-repressor MtfA2e-124445
NC_015663:4906652:492251549225154923312798Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDgsA anti-repressor MtfA5e-124443
NC_011283:1901229:191443619144361915233798Klebsiella pneumoniae 342 chromosome, complete genomeMlc titration factor MtfA4e-122437
NC_020211:3398281:341589234158923416692801Serratia marcescens WW4, complete genomeanti-repressor for DgsA(Mlc)5e-102370
NC_014306:3006028:301294830129483013739792Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein2e-101369
NC_008800:2806827:280992928099292810732804Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-96352
NC_003143:1973867:197723819772381978050813Yersinia pestis CO92, complete genomehypothetical protein4e-95347
NC_008149:2652825:267199226719922672804813Yersinia pestis Nepal516, complete genomehypothetical protein4e-95347
NC_017047:2079368:211341921134192114198780Rahnella aquatilis HX2 chromosome, complete genomeDgsA anti-repressor MtfA3e-94345
NC_016818:2836851:284324528432452844021777Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein4e-94344
NC_013508:1289159:132462013246201325396777Edwardsiella tarda EIB202, complete genomehypothetical protein2e-93342
NC_014500:1862000:190643719064371907228792Dickeya dadantii 3937 chromosome, complete genomehypothetical protein1e-91336
NC_014562:1883517:188956018895601890336777Pantoea vagans C9-1 chromosome, complete genomeUncharacterized protein yeeI1e-91336
NC_013421:1696746:171636817163681717165798Pectobacterium wasabiae WPP163, complete genomeprotein of unknown function DUF9809e-91333
NC_012880:2871480:287871128787112879508798Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9805e-90330
NC_012912:2901021:291685829168582917625768Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF9803e-89328
NC_004547:1873390:192732519273251928122798Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein2e-88325
NC_010159:1710268:172933817293381729988651Yersinia pestis Angola, complete genome1e-77289
NC_015424:2462522:246642724664272467236810Aeromonas veronii B565 chromosome, complete genomehypothetical protein8e-41167
NC_007969:1664500:168031816803181681073756Psychrobacter cryohalolentis K5, complete genomeprotein of unknown function DUF9802e-40165
NC_015379:6023926:602988960298896030701813Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-39162
NC_004129:6240904:624962362496236250435813Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-39162
NC_016830:5994494:600030360003036001115813Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein4e-39161
NC_017986:3283433:329741432974143298229816Pseudomonas putida ND6 chromosome, complete genomehypothetical protein7e-39160
NC_018012:3300000:331687533168753317675801Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein2e-37155
NC_013861:1498212:150013815001381500902765Legionella longbeachae NSW150, complete genomehypothetical protein5e-37154
NC_014722:1191380:120983712098371210676840Burkholderia rhizoxinica HKI 454, complete genomeMtfA protein4e-33141
NC_006512:1942000:194608319460831946802720Idiomarina loihiensis L2TR, complete genomePredicted Zn-dependent hydrolase3e-31135
NC_008789:7347:134001340014152753Halorhodospira halophila SL1, complete genomeprotein of unknown function DUF9801e-29130
NC_014315:2834000:285283828528382853632795Nitrosococcus watsoni C-113 chromosome, complete genomehypothetical protein1e-28126
NC_019772:169269:215131215131215985855Anabaena cylindrica PCC 7122 plasmid pANACY.01, complete sequenceprotein of unknown function DUF9801e-25117
NC_010506:1893000:190866019086601909499840Shewanella woodyi ATCC 51908, complete genomeprotein of unknown function DUF9804e-25115
NC_015947:280095:281819281819282610792Burkholderia sp. JV3 chromosome, complete genomehypothetical protein2e-22106
NC_020054:4550000:455467545546754555535861Fibrella aestuarina BUZ 2 drat genomehypothetical protein1e-0963.9