Pre_GI: BLASTP Hits

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Query: NC_004631:948054:973891 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 973891, End: 974412, Length: 522

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:948029:9715669715669735421977Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Site-specific DNA-methyltransferase1e-98358
NC_011745:2209288:2240713224071322426111899Escherichia coli ED1a chromosome, complete genomesite-specific DNA-methyltransferase, component of type III restriction-modification system3e-92337
NC_015381:4363005:437836143783614379278918Burkholderia gladioli BSR3 chromosome 1, complete sequence3e-44177
NC_010002:4572573:4605537460553746075221986Delftia acidovorans SPH-1, complete genomeDNA methylase N-4/N-6 domain protein9e-40162
NC_010170:4463000:4487301448730144891991899Bordetella petrii, complete genometype III restriction system methylase1e-39162
NC_007519:1782067:1800075180007518014121338Desulfovibrio alaskensis G20 chromosome, complete genomeadenine specific DNA methylase Mod-like1e-36152
NC_020387:149890:1643621643621662841923Dehalococcoides mccartyi BTF08, complete genometype III restriction-modification protein, methylation subunit6e-36149
NC_008609:206313:2295852295852314651881Pelobacter propionicus DSM 2379, complete genomeDNA methylase N-4/N-6 domain protein9e-35145
NC_013124:1439915:1452724145272414546791956Acidimicrobium ferrooxidans DSM 10331, complete genomeDNA methylase N-4/N-6 domain protein4e-33140
NC_008752:166877:1753611753611773672007Acidovorax avenae subsp. citrulli AAC00-1, complete genomeSite-specific DNA-methyltransferase (adenine-specific)2e-31135
NC_012724:1:1648616486185102025Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein8e-30129
NC_019972:110500:1176821176821195741893Methanomethylovorans hollandica DSM 15978 plasmid pMETHO01,adenine specific DNA methylase Mod1e-28125
NC_020301:1486695:1486695148669514885361842Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeadenine specific DNA methylase Mod3e-26117
NC_010161:1844452:1844452184445218462841833Bartonella tribocorum CIP 105476, complete genometype III restriction system methylase1e-22105
NC_010161:2050816:2050816205081620526811866Bartonella tribocorum CIP 105476, complete genometype III restriction system methylase2e-22105
NC_010655:1808657:1818113181811318200111899Akkermansia muciniphila ATCC BAA-835, complete genomeDNA methylase N-4/N-6 domain protein2e-21101
NC_014206:2266000:2271726227172622736271902Geobacillus sp. C56-T3 chromosome, complete genomeadenine-specific DNA-methyltransferase9e-2199.4
NC_014915:1331459:1343711134371113456571947Geobacillus sp. Y412MC52 chromosome, complete genomeSite-specific DNA-methyltransferase (adenine-specific)2e-2098.2
NC_013411:2191514:2203766220376622057121947Geobacillus sp. Y412MC61, complete genomeSite-specific DNA-methyltransferase (adenine-specific)2e-2098.2
NC_015942:1920693:1934342193434219362491908Acidithiobacillus ferrivorans SS3 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-2096.7
NC_007681:542494:553904553904554671768Methanosphaera stadtmanae DSM 3091, complete genomepartially conserved hypothetical protein7e-1890.1
NC_009454:136468:1432821432821451441863Pelotomaculum thermopropionicum SI, complete genomeadenine specific DNA methylase Mod5e-1787
NC_008054:1030994:1039518103951810413921875Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType III restriction-modification system methyltransferase2e-1684.7
NC_019897:73957:1047711047711066601890Thermobacillus composti KWC4 chromosome, complete genomeadenine specific DNA methylase Mod7e-1580.1
NC_015635:3860570:3869591386959138715551965Microlunatus phosphovorus NM-1, complete genometype III restriction-modification system methyltransferase9e-1579.7
NC_017267:2326443:2335133233513323370281896Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype III restriction-modification system methyltransferase2e-1478.2
NC_010644:231486:2392872392872412571971Elusimicrobium minutum Pei191, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-1477
NC_016633:3069518:3124223312422331261211899Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeadenine specific DNA methylase Mod8e-1476.6
NC_002936:1004570:1015763101576310175261764Dehalococcoides ethenogenes 195, complete genometype III restriction-modification system, methylase subunit7e-1476.6
NC_013410:1591500:1605769160576916076881920Fibrobacter succinogenes subsp. succinogenes S85 chromosome,adenine-specific DNA-methyltransferase1e-1375.5
NC_002927:960369:9760709760709779111842Bordetella bronchiseptica RB50, complete genometype III restriction-modification system methyltransferase4e-1374.3
NC_014169:1099024:1125542112554211274761935Bifidobacterium longum subsp. longum JDM301 chromosome, completeadenine specific DNA methylase Mod2e-1168.6
NC_013037:6281164:6303544630354463054691926Dyadobacter fermentans DSM 18053, complete genomeSite-specific DNA-methyltransferase (adenine- specific)1e-1066.2
NC_021184:1484352:1496582149658214983421761Desulfotomaculum gibsoniae DSM 7213, complete genomeadenine specific DNA methylase Mod3e-1064.3
NC_014828:2038692:2055432205543220573121881Ethanoligenens harbinense YUAN-3 chromosome, complete genomeSite-specific DNA-methyltransferase (adenine-specific)3e-0961.2
NC_015635:3860570:3871555387155538735401986Microlunatus phosphovorus NM-1, complete genomeputative type III restriction-modification system methyltransferase4e-0960.8
NC_010831:1224000:1233582123358212355161935Chlorobium phaeobacteroides BS1, complete genomeSite-specific DNA-methyltransferase (adenine-specific)5e-0960.5
NC_013204:989103:1001192100119210029521761Eggerthella lenta DSM 2243, complete genomeDNA methylase N-4/N-6 domain protein8e-0960.1
NC_011666:2109274:2119816211981621217111896Methylocella silvestris BL2, complete genomeSite-specific DNA-methyltransferase (adenine-specific)1e-0859.3
NC_008942:1198000:1228056122805612299661911Methanocorpusculum labreanum Z, complete genomehypothetical protein3e-0857.8
NC_020244:3961337:3973337397333739753462010Bacillus subtilis XF-1, complete genomehypothetical protein2e-0755.1
NC_008261:421000:4324724324724345232052Clostridium perfringens ATCC 13124, complete genometype III restriction-modification system, Mod subunit7e-0753.1
NC_014377:1943476:1957961195796119600572097Thermosediminibacter oceani DSM 16646 chromosome, complete genomeSite-specific DNA-methyltransferase (adenine-specific)1e-0652.8
NC_010337:2950500:2958249295824929601621914Heliobacterium modesticaldum Ice1, complete genomeDNA methylase2e-0652.4
NC_021184:4312000:4314769431476943166311863Desulfotomaculum gibsoniae DSM 7213, complete genomeadenine specific DNA methylase Mod3e-0651.6