Pre_GI: BLASTP Hits

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Query: NC_004631:948054:956794 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 956794, End: 957657, Length: 864

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:948029:956748956748957611864Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-162569
NC_011745:2209288:226570122657012266564864Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-151534
NC_004547:1873390:188881018888101889685876Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-102371
NC_016831:947281:956178956178957053876Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-100364
NC_011294:2053991:208640120864012087276876Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-100364
NC_011274:2044000:207752920775292078404876Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-100364
NC_011205:2180598:221341622134162214291876Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-99363
NC_011601:2139188:214765021476502148525876Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-100363
NC_011149:1987291:201655220165522017397846Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein3e-99361
NC_008253:1938975:196888519688851969721837Escherichia coli 536, complete genomehypothetical protein1e-42173
NC_004431:2185750:221572722157272216620894Escherichia coli CFT073, complete genomehypothetical protein2e-42172
NC_013716:2139952:216309721630972163942846Citrobacter rodentium ICC168, complete genomehypothetical protein5e-42171
NC_016816:1545354:155310715531071553958852Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-1273.9
NC_012125:4716000:472389247238924724803912Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1273.2
NC_013421:1819036:184796518479651848831867Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-1273.2
NC_006905:4638707:464661946466194647488870Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein6e-1271.6
NC_012917:1840172:184911218491121849981870Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein3e-1169.3
NC_013421:1696746:170251417025141702660147Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-0963.5
NC_011283:4438500:445377944537794454645867Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0963.2
NC_011094:2791719:281369328136932814544852Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-0860.8
NC_002655:3538656:356633635663363567187852Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-0860.5
NC_002695:3468873:349904634990463499897852Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0860.5
NC_011353:3573641:360328236032823604133852Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-0860.5
NC_013008:3525428:355800735580073558858852Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-0860.5
NC_013941:3300000:333677833367783337629852Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-0860.5
NC_010067:191190:198452198452199297846Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0860.1
NC_016514:3573400:360031736003173601171855Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-0757.4
NC_009801:2898426:293212929321292932983855Escherichia coli E24377A, complete genomehypothetical protein2e-0756.6
NC_009792:3665369:369124536912453692090846Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-0755.5
NC_009436:3117661:314648831464883147342855Enterobacter sp. 638, complete genomehypothetical protein4e-0755.5
NC_008800:1090000:109752010975201098374855Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-0653.5