Pre_GI: BLASTP Hits

Some Help

Query: NC_004631:948054:953913 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 953913, End: 954239, Length: 327

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2053991:209636920963692096695327Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-58222
NC_011274:2044000:208750220875022087828327Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-58222
NC_011205:2180598:222338222233822223708327Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-58222
NC_011094:2061000:206332720633272063653327Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-57220
NC_010634:2004653:201516020151602015486327Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-41167
NC_020260:3355814:337473733747373375063327Cronobacter sakazakii Sp291, complete genomehypothetical protein3e-38157
NC_013282:551219:576480576480576722243Cronobacter turicensis, complete genomehypothetical protein1e-27121
NC_011094:1584038:159512715951271595459333Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-24111
NC_003197:1611302:162744416274441627776333Salmonella typhimurium LT2, complete genomehypothetical protein2e-24110
NC_016810:1576636:158429715842971584629333Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-24110
NC_016856:1621279:163742116374211637753333Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-24110
NC_016857:1576636:158429715842971584629333Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-24110
NC_016860:1614280:162513416251341625466333Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-24110
NC_016863:1575488:158561215856121585944333Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-24110
NC_017046:1574057:158418115841811584513333Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-24110
NC_020260:3004500:301276730127673013096330Cronobacter sakazakii Sp291, complete genomehypothetical protein7e-22102
NC_020064:3157656:317040931704093170702294Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1493)1e-1271.6
NC_013956:595320:621712621712621948237Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-1270.1
NC_011149:1578451:158597015859701586185216Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-1167.8
NC_009778:1717458:172021417202141720528315Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0858.2
NC_020064:521500:527914527914528264351Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF1493)3e-0857
NC_013282:923500:935959935959936309351Cronobacter turicensis, complete genomehypothetical protein3e-0753.9
NC_010694:614985:636011636011636307297Erwinia tasmaniensis, complete genomePutative acyl carrier protein6e-0753.1
NC_010102:2967464:300867930086793009026348Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-0752.8
NC_003197:3005842:304569730456973046044348Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein7e-0752.8
NC_016810:3028421:306827330682733068620348Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 protein7e-0752.8
NC_016856:3026426:306593430659343066281348Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein7e-0752.8
NC_016857:3028421:306827330682733068620348Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein7e-0752.8
NC_016860:3029272:306912730691273069474348Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein7e-0752.8
NC_016863:2974333:301418730141873014534348Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein7e-0752.8
NC_010067:51000:600996009960446348Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0752.4
NC_006905:2630000:263940826394082639722315Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-0650.8