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Query: NC_004631:948054:953533 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 953533, End: 953919, Length: 387

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020260:3004500:301309030130903013548459Cronobacter sakazakii Sp291, complete genomehypothetical protein6e-37152
NC_013282:551219:576260576260576403144Cronobacter turicensis, complete genomehypothetical protein1e-1375.5
NC_013282:923500:935522935522935968447Cronobacter turicensis, complete genomehypothetical protein1e-1168.6
NC_009778:567000:571993571993572448456Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1167.8
NC_012214:2805297:282015128201512820522372Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein4e-0856.6
NC_010694:614985:635553635553636014462Erwinia tasmaniensis, complete genomehypothetical protein7e-1785.9
NC_013956:3525711:353231635323163532783468Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein9e-1785.5
NC_010067:51000:604316043160880450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-1372.4
NC_011294:2053991:209668920966892097075387Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-66250
NC_011274:2044000:208782220878222088208387Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-66249
NC_010102:2967464:300824530082453008694450Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1374.3
NC_011094:1584038:159467515946751595133459Salmonella enterica subsp. enterica serovar Schwarzengrund strphage membrane protein6e-38155
NC_016860:3029272:306869330686933069142450Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein3e-1373.9
NC_016810:3028421:306783930678393068288450Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity island 1 protein3e-1373.9
NC_016856:3026426:306550030655003065949450Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein3e-1373.9
NC_016857:3028421:306783930678393068288450Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein3e-1373.9
NC_016863:2974333:301375330137533014202450Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein3e-1373.9
NC_003197:3005842:304526330452633045712450Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein3e-1373.9
NC_020064:521500:527477527477527920444Serratia marcescens FGI94, complete genomehypothetical protein2e-1167.8
NC_020064:3157656:317069631706963171154459Serratia marcescens FGI94, complete genomehypothetical protein3e-28123
NC_010634:2004653:201692320169232017261339Yersinia pseudotuberculosis PB1/+, complete genomemembrane protein2e-34144