Pre_GI: BLASTP Hits

Some Help

Query: NC_004631:948054:951362 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 951362, End: 952819, Length: 1458

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:948029:9512479512479527731527Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MATE efflux0805
NC_011094:2061000:2064750206475020662761527Salmonella enterica subsp. enterica serovar Schwarzengrund strmate efflux family protein0802
NC_011205:2180598:2224801222480122263271527Salmonella enterica subsp. enterica serovar Dublin str. CT_020218530796
NC_011294:2053991:2097788209778820992451458Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein0795
NC_011274:2044000:2088921208892120903781458Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein0795
NC_014618:1809369:1828855182885518302791425Enterobacter cloacae SCF1 chromosome, complete genomeMATE efflux family protein0704
NC_010067:892729:8927298927298941591431Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0691
NC_009436:2776410:2778429277842927798711443Enterobacter sp. 638, complete genomehypothetical protein0686
NC_016612:5231065:5250298525029852517551458Klebsiella oxytoca KCTC 1686 chromosome, complete genomeMATE family multidrug exporter0667
NC_013850:1753716:1776480177648017779491470Klebsiella variicola At-22 chromosome, complete genomeMATE efflux family protein0663
NC_012947:1769438:1774970177497017764571488Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein0662
NC_000913:2042935:2056227205622720578701644Escherichia coli K12, complete genomepredicted multidrug efflux system0662
NC_010473:2119480:2147235214723521488781644Escherichia coli str. K-12 substr. DH10B, complete genomepredicted multidrug efflux system0662
AC_000091:2027648:2060340206034020619831644Escherichia coli W3110 DNA, complete genomepredicted multidrug efflux system0662
NC_012759:1920955:1948710194871019503531644Escherichia coli BW2952 chromosome, complete genomehypothetical protein0662
NC_012967:1967675:1996203199620319978461644Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein0662
NC_016822:2201388:2233186223318622348261641Shigella sonnei 53G, complete genomeMATE family multidrug exporter0662
NC_009800:2083465:2096806209680620984461641Escherichia coli HS, complete genomeMATE efflux family protein0661
NC_011601:2139188:2173238217323821748781641Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein0661
NC_011745:2209288:2235917223591722375601644Escherichia coli ED1a chromosome, complete genomehypothetical protein0658
NC_010468:1816359:1848651184865118501381488Escherichia coli ATCC 8739, complete genomeMATE efflux family protein0657
NC_020181:527592:5683845683845698231440Enterobacter aerogenes EA1509E, complete genomePutative inner membrane protein0654
NC_013421:3117639:3131759313175931331831425Pectobacterium wasabiae WPP163, complete genomeMATE efflux family protein2e-137489
NC_012917:1840172:1843503184350318449331431Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMATE efflux family protein9e-137487
NC_013592:1668092:1689904168990416913401437Dickeya dadantii Ech586, complete genomeMATE efflux family protein1e-134480
NC_012880:1765920:1786595178659517881031509Dickeya dadantii Ech703, complete genomeMATE efflux family protein3e-131468
NC_013316:4095905:4095905409590540972631359Clostridium difficile R20291, complete genomeputative multidrug resistance protein3e-49196
NC_013315:4015119:4015119401511940164771359Clostridium difficile CD196 chromosome, complete genomemultidrug resistance protein3e-49196
NC_017179:4023139:4023139402313940244971359Clostridium difficile BI1, complete genomemultidrug resistance protein3e-49196
NC_015578:3561838:3578415357841535797581344Treponema primitia ZAS-2 chromosome, complete genomeMATE efflux family protein2e-25117
NC_012778:1778654:1800244180024418015931350Eubacterium eligens ATCC 27750, complete genomemultidrug resistance protein, MATE family6e-23109
NC_015474:328500:3403903403903417811392Pyrococcus sp. NA2 chromosome, complete genomeDNA damage-inducible protein1e-1791.7
NC_009922:944538:9660059660059674081404Alkaliphilus oremlandii OhILAs, complete genomeMATE efflux family protein1e-1791.3
NC_012440:1080675:1096173109617310974771305Persephonella marina EX-H1, complete genomesodium-driven multidrug efflux pump protein5e-1789.7
NC_011899:1969187:1973825197382519751531329Halothermothrix orenii H 168, complete genomeMATE efflux family protein8e-1479
NC_012438:1564794:1578334157833415796591326Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomesodium-driven multidrug efflux pump protein8e-1375.5
NC_012924:277325:2773252773252786021278Streptococcus suis SC84, complete genomemulti antimicrobial extrusion (MATE) family transporter3e-1273.6
NC_012925:275704:2777602777602790371278Streptococcus suis P1/7, complete genomemulti antimicrobial extrusion (MATE) family transporter3e-1273.6
NC_009443:277246:2772462772462785291284Streptococcus suis 98HAH33, complete genomeNa+-driven multidrug efflux pump4e-1273.6
NC_009442:277392:2773922773922786751284Streptococcus suis 05ZYH33 chromosome, complete genomeNa+-driven multidrug efflux pump4e-1273.6
NC_020063:2785652:2789029278902927903691341Enterobacteriaceae bacterium strain FGI 57, complete genomeputative efflux protein, MATE family3e-1170.5
NC_019978:922978:9229789229789243481371Halobacteroides halobius DSM 5150, complete genomeputative efflux protein, MATE family9e-1168.6
NC_009785:130252:1463971463971476741278Streptococcus gordonii str. Challis substr. CH1, complete genomeMulti antimicrobial extrusion family transporter, putative4e-1066.6
NC_014019:2661000:2671475267147526729021428Bacillus megaterium QM B1551 chromosome, complete genomeMATE efflux family protein5e-1066.2
NC_014103:2635695:2650881265088126522751395Bacillus megaterium DSM319 chromosome, complete genomeMATE efflux family protein6e-1066.2
NC_012471:51305:6667366673679831311Streptococcus equi subsp. equi 4047, complete genomemulti antimicrobial extrusion (MATE) family transporter7e-1065.9
NC_012914:469117:4957944957944971881395Paenibacillus sp. JDR-2, complete genomeMATE efflux family protein2e-0964.7
NC_011134:51218:676716767168417747Streptococcus equi subsp. zooepidemicus str. MGCS10565, completemulti antimicrobial extrusion (MATE) family transporter6e-0962.8
NC_015433:285581:2882272882272895041278Streptococcus suis ST3 chromosome, complete genomeMATE efflux family protein3e-0860.5
NC_006177:835459:8532008532008544501251Symbiobacterium thermophilum IAM 14863, complete genomeNa+-driven multidrug efflux protein6e-0859.3
NC_019897:3467618:3468591346859134699671377Thermobacillus composti KWC4 chromosome, complete genomeefflux protein, MATE family9e-0858.9
NC_016935:976059:9784369784369798271392Paenibacillus mucilaginosus 3016 chromosome, complete genomeMATE efflux family protein9e-0858.9
NC_016631:2112175:2113886211388621153041419Granulicella mallensis MP5ACTX8 chromosome, complete genomeMATE efflux family protein1e-0655.5
NC_013656:2382000:2396307239630723975091203Lactococcus lactis subsp. lactis KF147, complete genomeNa+ driven multidrug efflux pump1e-0654.7
NC_015690:7334786:7354044735404473554141371Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMATE efflux family protein2e-0654.3
NC_016935:7426389:7446133744613374475031371Paenibacillus mucilaginosus 3016 chromosome, complete genomeMATE efflux family protein2e-0654.3
NC_002973:1877905:1901813190181319031831371Listeria monocytogenes str. 4b F2365, complete genomemultidrug efflux protein NorA1e-0552