Pre_GI: BLASTP Hits

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Query: NC_004631:799810:810877 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 810877, End: 811377, Length: 501

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:799764:810831810831811331501Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-96350
NC_003198:2179688:219255921925592193059501Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-96350
NC_011149:2179592:219257121925712193071501Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-93340
NC_011147:792489:803532803532804032501Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-86316
NC_006511:792543:803586803586804086501Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-86316
NC_017516:1755500:179469817946981795192495Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein2e-29127
NC_017515:1744500:179217317921731792667495Neisseria meningitidis M04-240196 chromosome, complete genomehypothetical protein2e-29127
NC_003112:498465:505314505314505808495Neisseria meningitidis MC58, complete genomehypothetical protein2e-29127
NC_014752:933000:962713962713963204492Neisseria lactamica ST-640, complete genomehypothetical protein1e-25115
NC_017501:517758:524294524294524671378Neisseria meningitidis 8013, complete genome4e-2097.4
NC_002946:1020175:102200910220091022803795Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein7e-2096.3
NC_017511:543583:565329565329566066738Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein9e-1992.8
NC_011035:566980:589079589079589816738Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein9e-1992.8
NC_020418:2718500:272297927229792723485507Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-1580.9
NC_020418:2718500:272358627235862724092507Morganella morganii subsp. morganii KT, complete genomehypothetical protein9e-1476.3
NC_015460:418826:428004428004428528525Gallibacterium anatis UMN179 chromosome, complete genomehypothetical protein5e-0857
NC_002663:564958:574871574871575377507Pasteurella multocida subsp. multocida str. Pm70, complete genomehypothetical protein4e-0753.9