Pre_GI: BLASTP Hits

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Query: NC_004631:685357:703886 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 703886, End: 704341, Length: 456

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:2297837:230037223003722300827456Salmonella enterica subsp. enterica serovar Typhi str. CT18,bacteriophage tail fiber assembly protein (pseudogene)1e-84311
NC_006905:2355290:235775923577592358163405Salmonella enterica subsp. enterica serovar Choleraesuis strbacteriophage tail fiber assembly protein (pseudogene)2e-50197
NC_011274:2325840:232854423285442328834291Salmonella enterica subsp. enterica serovar Gallinarum str. 287/911e-49195
NC_010102:683444:702186702186702389204Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-32136
NC_003197:2327474:234342023434202343623204Salmonella typhimurium LT2, complete genomeputative phage tail fiber protein4e-32136
NC_016810:2325190:234113623411362341339204Salmonella enterica subsp. enterica serovar Typhimurium strputative tail fiber protein of bacteriophage4e-32136
NC_016856:2379027:239497323949732395176204Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage tail fiber protein4e-32136
NC_016857:2325190:234113623411362341339204Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bacteriophage tail fiber assembly protein4e-32136
NC_016863:2324293:234316523431652343368204Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage tail fiber protein4e-32136
NC_011205:2462025:246456024645602464829270Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-25113
NC_007613:1353500:137222913722291372762534Shigella boydii Sb227, complete genomeputative tail fiber assembly protein3e-1373.9
NC_007712:1182518:119294511929451193556612Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-1271.2
NC_007613:1353500:137279113727911373354564Shigella boydii Sb227, complete genomeputative tail fiber assembly protein9e-1269.3
NC_011740:621408:625989625989626549561Escherichia fergusonii ATCC 35469, complete genomehypothetical protein from phage origin4e-1166.6
NC_016810:2027311:204179520417952042394600Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail protein7e-1166.2
NC_011205:2137696:214882021488202149389570Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail fiber assembly protein1e-1065.9
NC_011294:2009388:202051320205132021082570Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein1e-1065.9
NC_016856:2085283:209563220956322096201570Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tail fiber assembly protein1e-1065.9
NC_016863:2029340:204382420438242044393570Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-1065.9
NC_017046:2026672:204115620411562041725570Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein1e-1065.9
NC_011094:2115750:212749021274902128065576Salmonella enterica subsp. enterica serovar Schwarzengrund strtail fiber assembly protein1e-0962
NC_010102:931055:940063940063940638576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0961.2
NC_012751:899394:915111915111915647537Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completephage tail assembly chaperone1e-0755.8
NC_011083:2375061:238241423824142382941528Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative phage tail fiber assembly protein3e-0754.3
NC_010102:683444:710448710448710975528Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0754.3
NC_003197:2327474:233483423348342335361528Salmonella typhimurium LT2, complete genomeputative phage tail fiber assembly protein2e-0754.3
NC_016810:2325190:233255023325502333077528Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail fiber assembly protein2e-0754.3
NC_016856:2379027:238638723863872386914528Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative phage tail fiber assembly protein2e-0754.3
NC_016857:2325190:233255023325502333077528Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative phage tail fiber assembly protein2e-0754.3
NC_016860:2323017:233037723303772330904528Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0754.3
NC_016863:2324293:233457923345792335106528Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative phage tail fiber assembly protein2e-0754.3
NC_017046:2324554:233191423319142332441528Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail fiber assembly protein2e-0754.3
NC_003198:1867456:188947118894711889989519Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative bacteriophage tail protein8e-0649.3