Pre_GI: BLASTP Hits

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Query: NC_004631:531254:552381 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 552381, End: 552932, Length: 552

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:531208:552335552335552886552Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein7e-105379
NC_012125:1360593:138290313829031383454552Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-105379
NC_011147:529458:550636550636551187552Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-104377
NC_006511:529424:550602550602551153552Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-104377
NC_014618:1452927:147094114709411471492552Enterobacter cloacae SCF1 chromosome, complete genomeSmr protein/MutS22e-95347
NC_009348:2034500:204926820492682049792525Aeromonas salmonicida subsp. salmonicida A449, complete genomeSmr/MutS family protein1e-52205
NC_008345:3199965:320481632048163205343528Shewanella frigidimarina NCIMB 400, complete genomeSmr protein/MutS21e-45182
NC_006512:952894:952894952894953457564Idiomarina loihiensis L2TR, complete genomehypothetical protein3e-45181
NC_009901:3148901:315346131534613153991531Shewanella pealeana ATCC 700345, complete genomeSmr protein/MutS22e-45181
NC_009092:2833865:283869728386972839224528Shewanella loihica PV-4, complete genomeSmr protein/MutS21e-44179
NC_009052:3229775:323328632332863233816531Shewanella baltica OS155, complete genomeSmr protein/MutS24e-44177
NC_010334:3224009:322743132274313227961531Shewanella halifaxensis HAW-EB4, complete genomeSmr protein/MutS25e-44177
NC_011663:1867000:188023518802351880765531Shewanella baltica OS223 chromosome, complete genomehypothetical protein8e-44176
NC_008322:1708631:172281717228171723410594Shewanella sp. MR-7, complete genomeSmr protein/MutS21e-43176
NC_004347:3197219:320071332007133201243531Shewanella oneidensis MR-1, complete genomehypothetical protein1e-43176
NC_008321:1636148:165145416514541651984531Shewanella sp. MR-4, complete genomeSmr protein/MutS21e-43175
NC_008577:1690946:170615317061531706683531Shewanella sp. ANA-3 chromosome 1, complete sequenceSmr protein/MutS21e-43175
NC_008700:2607526:261089926108992611429531Shewanella amazonensis SB2B, complete genomeSmr domain protein2e-40164
NC_004545:96422:102976102976103506531Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomehypothetical protein3e-33141
NC_012560:2348202:237502423750242375584561Azotobacter vinelandii DJ, complete genomemutS-related protein2e-1478.6
NC_021150:2348214:237503623750362375596561Azotobacter vinelandii CA6, complete genomemutS-related protein2e-1478.6
NC_014931:5088125:511899751189975119680684Variovorax paradoxus EPS chromosome, complete genomeSmr protein/MutS24e-1477.4
NC_014307:1131241:113190911319091132574666Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein1e-1375.9
NC_016830:4999946:500661050066105007224615Pseudomonas fluorescens F113 chromosome, complete genomeSmr domain protein3e-1374.7
NC_003295:2507850:254245025424502543115666Ralstonia solanacearum GMI1000, complete genomehypothetical protein4e-1374.3
NC_009074:2914053:293852129385212939258738Burkholderia pseudomallei 668 chromosome I, complete sequenceSmr domain protein6e-1373.9
NC_015424:3520783:356808935680893568670582Aeromonas veronii B565 chromosome, complete genomeSmr domain-containing protein8e-1373.2
NC_013446:4281250:430003543000354300691657Comamonas testosteroni CNB-2, complete genomeSmr protein/MutS24e-1270.9
NC_008344:811386:812483812483812941459Nitrosomonas eutropha C91, complete genomeSmr protein/MutS29e-1166.6
NC_015559:3645181:364940836494083649983576Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeSmr protein/MutS24e-1064.3
NC_017030:6297351:631033263103326311036705Corallococcus coralloides DSM 2259 chromosome, complete genomeSmr domain-containing protein4e-0960.8
NC_017513:997716:100407510040751004680606Neisseria meningitidis G2136 chromosome, complete genomeSmr domain protein6e-0960.5
NC_008554:484267:504331504331505092762Syntrophobacter fumaroxidans MPOB, complete genomeSmr protein/MutS22e-0858.9
NC_020064:3609844:364961136496113650183573Serratia marcescens FGI94, complete genomehypothetical protein3e-0858.2