Pre_GI: BLASTP Hits

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Query: NC_004631:531254:551847 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 551847, End: 552332, Length: 486

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004757:905417:923421923421923873453Nitrosomonas europaea ATCC 19718, complete genomePhosphoglycerate mutase family9e-0752.8
NC_011147:529458:550051550051550536486Salmonella enterica subsp. enterica serovar Paratyphi A strphosphohistidine phosphatase1e-89327
CP002185:2608000:260807626080762608561486Escherichia coli W, complete genomephosphohistidine phosphatase8e-82301
NC_012125:1360593:138231813823181382803486Salmonella enterica subsp. enterica serovar Paratyphi C strainphosphohistidine phosphatase1e-89328
NC_013361:3254000:325414932541493254634486Escherichia coli O26:H11 str. 11368 chromosome, complete genomephosphohistidine phosphatase8e-82301
NC_016831:531404:552146552146552532387Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphosphohistidine phosphatase4e-69259
NC_006511:529424:550017550017550502486Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphosphohistidine phosphatase1e-89327
NC_009348:1968826:198598919859891986456468Aeromonas salmonicida subsp. salmonicida A449, complete genomephosphohistidine phosphatase3e-27120
NC_004347:3197219:320132132013213201791471Shewanella oneidensis MR-1, complete genomephosphohistidine phosphatase SixA3e-27120
NC_020829:2152000:217399921739992174463465Pseudomonas denitrificans ATCC 13867, complete genomephosphohistidine phosphatase SixA4e-1063.9
NC_007645:2842957:284249928424992842960462Hahella chejuensis KCTC 2396, complete genomephosphohistidine phosphatase SixA5e-0960.5
NC_006512:952894:953461953461953943483Idiomarina loihiensis L2TR, complete genomePhosphohistidine phosphatase SixA4e-1787
NC_013769:316789:322557322557323042486Sulfolobus islandicus L.D.8.5 chromosome, complete genomephosphohistidine phosphatase SixA2e-1064.7
NC_011663:1867000:187963018796301880100471Shewanella baltica OS223 chromosome, complete genomephosphohistidine phosphatase SixA2e-27120
NC_017276:320000:326458326458326943486Sulfolobus islandicus REY15A chromosome, complete genomephosphohistidine phosphatase SixA2e-1064.7
NC_016832:531208:551900551900552286387Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phosphohistidine phosphatase sixA3e-70263
NC_008321:1636148:165091716509171651387471Shewanella sp. MR-4, complete genomephosphohistidine phosphatase, SixA7e-28122
NC_010334:3224009:322805732280573228527471Shewanella halifaxensis HAW-EB4, complete genomephosphohistidine phosphatase, SixA8e-27119
NC_015410:2505168:250873925087392509197459Pseudomonas mendocina NK-01 chromosome, complete genomephosphohistidine phosphatase, SixA7e-1269.7
NC_009092:2833865:283939828393982839868471Shewanella loihica PV-4, complete genomephosphohistidine phosphatase, SixA4e-29127
NC_009052:3229775:323391432339143234384471Shewanella baltica OS155, complete genomephosphohistidine phosphatase, SixA2e-27120
NC_008322:1708631:172228017222801722750471Shewanella sp. MR-7, complete genomephosphohistidine phosphatase, SixA3e-27120
NC_009256:1365500:137562013756201376081462Burkholderia vietnamiensis G4 chromosome 1, complete sequencephosphohistidine phosphatase, SixA5e-0753.5
NC_014618:1452927:147042314704231470908486Enterobacter cloacae SCF1 chromosome, complete genomephosphohistidine phosphatase, SixA3e-82303
NC_008577:1690946:170561717056171706087471Shewanella sp. ANA-3 chromosome 1, complete sequencephosphohistidine phosphatase, SixA3e-27120
NC_012622:327821:329078329078329563486Sulfolobus islandicus Y.G.57.14 chromosome, complete genomephosphohistidine phosphatase, SixA5e-1063.5
NC_008345:3199965:320543632054363205909474Shewanella frigidimarina NCIMB 400, complete genomephosphohistidine phosphatase, SixA2e-27121
NC_009901:3148901:315415831541583154628471Shewanella pealeana ATCC 700345, complete genomephosphohistidine phosphatase, SixA9e-27119
NC_007963:2777066:279642527964252796910486Chromohalobacter salexigens DSM 3043, complete genomephosphohistidine phosphatase, SixA8e-1269.7
NC_012623:2369671:238197123819712382456486Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephosphohistidine phosphatase, SixA5e-1063.5
NC_008390:1293823:131116213111621311620459Burkholderia cepacia AMMD chromosome 1, complete sequencephosphohistidine phosphatase, SixA3e-0857.4
NC_007181:1818500:183163318316331832109477Sulfolobus acidocaldarius DSM 639, complete genomephosphohistidine phosphatase/mutase4e-0960.5
NC_010084:2171881:219360921936092194070462Burkholderia multivorans ATCC 17616 chromosome 1, completeputative phosphohistidine phosphatase SixA4e-0650.8
NC_008700:2607526:261155526115552612025471Shewanella amazonensis SB2B, complete genomeputative phosphohistidine phosphatase, SixA1e-24112
NC_007973:2348481:238112223811222381598477Ralstonia metallidurans CH34 chromosome 1, complete sequenceputative phosphohistidine phosphatase, SixA2e-0754.7