Pre_GI: BLASTP Hits

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Query: NC_004631:531254:533081 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 533081, End: 534274, Length: 1194

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2492168:2509554250955425107471194Salmonella enterica subsp. enterica serovar Enteritidis strphosphoglycerate transport regulatory protein PgtC0810
NC_011274:2483038:2500453250045325016461194Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phosphoglycerate transport regulatory protein PgtC0810
NC_003198:2453074:2470438247043824716311194Salmonella enterica subsp. enterica serovar Typhi str. CT18,phosphoglycerate transport regulatory protein PgtC precursor0810
NC_006511:529424:5312515312515324441194Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphosphoglycerate transport regulatory protein PgtC precursor0808
NC_011147:529458:5312855312855324781194Salmonella enterica subsp. enterica serovar Paratyphi A strphosphoglycerate transport regulatory protein PgtC0808
NC_012125:1330066:1328846132884613300691224Salmonella enterica subsp. enterica serovar Paratyphi C strainphosphoglycerate transport regulatory protein PgtC0808
NC_016831:531404:5332015332015344241224Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphosphoglycerate transport regulatory protein PgtC precursor0806
NC_011083:2542876:2567632256763225688551224Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,phosphoglycerate transport: protein for signal transmission0804
NC_016832:531208:5331465331465342281083Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phosphoglycerate transport regulatory protein pgtC0730
NC_009648:1882500:1903759190375919049881230Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomephosphoglycerate transporter0683
NC_011742:3245500:3245594324559432469011308Escherichia coli S88 chromosome, complete genomePhosphoglycerate transport regulatory protein0675
NC_008253:3122148:3144137314413731454081272Escherichia coli 536, complete genomeregulatory protein0675
NC_008563:3332114:3330846333084633321171272Escherichia coli APEC O1, complete genomephosphoglycerate transport regulatory protein0675
NC_004431:4955658:4955658495565849569651308Escherichia coli CFT073, complete genomeRegulatory protein0672
NC_008321:3189974:3201113320111332024261314Shewanella sp. MR-4, complete genomeputative phosphoglycerate transport regulatory protein PgtC4e-45182
NC_008701:62931:7049670496719921497Pyrobaculum islandicum DSM 4184, complete genomeextracellular solute-binding protein, family 16e-1995.5
NC_014122:967194:9842959842959853201026Methanocaldococcus infernus ME chromosome, complete genomeextracellular solute-binding protein family 17e-1685.5
NC_014205:622627:6226276226276243871761Staphylothermus hellenicus DSM 12710 chromosome, complete genomeextracellular solute-binding protein family 12e-1583.6
NC_017297:1280963:129455712945571295387831Clostridium botulinum F str. 230613 chromosome, complete genomeABC transporter substrate-binding protein8e-1582
NC_012563:1348500:1363689136368913647351047Clostridium botulinum A2 str. Kyoto, complete genomeABC transporter, substrate-binding protein9e-1581.6
NC_015376:965000:9682399682399692551017Burkholderia gladioli BSR3 chromosome chromosome 2, completeextracellular solute-binding family protein 153e-1066.6
NC_013446:4723380:4749627474962747506761050Comamonas testosteroni CNB-2, complete genomeperiplasmic iron binding protein5e-0962.8
NC_014121:3235911:3241377324137732423931017Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeiron(III) ABC transporter, periplasmic iron(III)-binding protein2e-0757.4
NC_012962:869295:8692958692958703261032Photorhabdus asymbiotica, complete genomeperiplasmic ferric iron-binding protein (putative periplasmic-iron binding protein)2e-0653.9