Pre_GI: BLASTP Hits

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Query: NC_004631:4381724:4385462 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 4385462, End: 4386148, Length: 687

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4397074:440081244008124401498687Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein5e-124443
NC_011147:4297513:430330043033004304004705Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-123442
NC_011094:4442478:444632944463294446982654Salmonella enterica subsp. enterica serovar Schwarzengrund stroxidoreductase1e-115415
NC_006905:4486433:449028444902844490937654Salmonella enterica subsp. enterica serovar Choleraesuis strputative component of anaerobic dehydrogenase6e-115413
NC_011274:4385039:439089543908954391548654Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein7e-115412
NC_011294:4409137:441298744129874413640654Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-114412
NC_003197:4551880:455573145557314556384654Salmonella typhimurium LT2, complete genomeputative anaerobic dehydrogenase component8e-114409
NC_016810:4573172:457702345770234577676654Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-114409
NC_016856:4563435:456927345692734569926654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative anaerobic dehydrogenase component8e-114409
NC_016857:4573173:457702445770244577677654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative anaerobic dehydrogenase component8e-114409
NC_016863:4513106:451687945168794517532654Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative anaerobic dehydrogenase component8e-114409
NC_016832:4368948:437277943727794373372594Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oxidoreductase component2e-105381
NC_011080:4543000:454691045469104547503594Salmonella enterica subsp. enterica serovar Newport str. SL254,oxidoreductase component6e-104376
NC_012125:4481808:448571944857194486312594Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-103374
NC_016831:4367000:437110143711014371694594Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-103372
NC_011083:4547825:455173645517364552329594Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-102372
NC_011205:4564645:457054345705434571136594Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-102371
NC_010102:4477836:448174744817474482340594Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-102370
NC_016860:4649274:465318546531854653778594Salmonella enterica subsp. enterica serovar Typhimurium strputative anaerobic dehydrogenase component4e-102370
NC_017046:4571833:457574445757444576337594Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-102370
NC_011149:4474012:447792344779234478516594Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-101369
NC_012962:1827000:182919018291901829786597Photorhabdus asymbiotica, complete genometwin-arginine leader-binding protein dmsd7e-45180
NC_005126:3485330:350146835014683501872405Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-24113
NC_016818:1605918:160684516068451607453609Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative component of anaerobic dehydrogenase6e-2097.4
NC_015061:1598920:159984715998471600455609Rahnella sp. Y9602 chromosome, complete genomecytoplasmic chaperone TorD family protein1e-1996.7
NC_017047:1551836:155276315527631553371609Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein1e-1996.7
NC_016513:810259:811531811531812145615Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completetwin-arginine leader-binding protein DmsD4e-1788.2
NC_009831:1539159:155485015548501555464615Shewanella sediminis HAW-EB3, complete genomecytoplasmic chaperone TorD family protein9e-1580.5
NC_010939:1920781:192932819293281929933606Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehypothetical protein5e-1478.2
NC_009053:1895485:190402719040271904632606Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein8e-1477.4
NC_016514:1701273:170476517047651705319555Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcdY2e-1066.2
NC_014121:2629075:264489726448972645451555Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecytoplasmic chaperone TorD family protein3e-1065.5
NC_013716:1178383:119704111970411197595555Citrobacter rodentium ICC168, complete genomeputative chaperone9e-1063.9
NC_017047:1796000:181141618114161812000585Rahnella aquatilis HX2 chromosome, complete genomecytoplasmic chaperone TorD family protein8e-1063.9
NC_016901:2594942:260227826022782602943666Shewanella baltica OS678 chromosome, complete genomeTorD-like chaperone2e-0962.8
NC_009997:2635025:264236126423612643026666Shewanella baltica OS195, complete genomecytoplasmic chaperone TorD family protein2e-0962.8
NC_012125:2646792:264824626482462648800555Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-0962.4
NC_011294:2009388:201128620112862011840555Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein3e-0962.4
NC_011205:2137696:213959421395942140148555Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853chaperone, TorD family3e-0962.4
NC_011147:1763681:176665617666561767210555Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0962.4
NC_011083:1216500:123119812311981231752555Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,chaperone, TorD family3e-0962.4
NC_003198:1117687:113712511371251137679555Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-0962.4
NC_006511:1770000:177147317714731772027555Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-0962.4
NC_003197:1207597:122684912268491227403555Salmonella typhimurium LT2, complete genomeputative oxidoreductase component3e-0962.4
NC_006905:1186895:120693512069351207489555Salmonella enterica subsp. enterica serovar Choleraesuis strparal putative oxidoreductase component3e-0962.4
NC_004631:1842050:184350418435041844058555Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-0962.4
NC_011080:1209935:122863612286361229190555Salmonella enterica subsp. enterica serovar Newport str. SL254,chaperone, TorD family3e-0962.4
NC_010102:1979742:198120019812001981751552Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0962.4
NC_007907:5185510:522489052248905225564675Desulfitobacterium hafniense Y51, complete genomeuncharacterized component of anaerobic dehydrogenase3e-0962.4
NC_016810:1163919:118298911829891183543555Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-0962.4
NC_016832:1838220:184053918405391841093555Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-0962.4
NC_016856:1165941:118501111850111185565555Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative oxidoreductase3e-0962.4
NC_017265:2213500:223213822321382232698561Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-0962.4
NC_017168:3433804:345277034527703453330561Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-0962.4
NC_017160:2212806:223196122319612232521561Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-0962.4
NC_014029:2285323:230446223044622305022561Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-0962.4
NC_009708:2347350:236523923652392365799561Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeTorD family cytoplasmic chaperone2e-0962.4
NC_009381:1205900:122498712249871225547561Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-0962.4
NC_004088:2491303:251047425104742511034561Yersinia pestis KIM, complete genomeoxidoreductase component2e-0962.4
NC_010159:2546590:256560625656062566166561Yersinia pestis Angola, complete genomecytoplasmic chaperone, TorD family2e-0962.4
NC_016857:1163919:118298911829891183543555Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative oxidoreductase3e-0962.4
NC_016860:1205282:122453512245351225089555Salmonella enterica subsp. enterica serovar Typhimurium strchaperone, TorD family protein3e-0962.4
NC_016863:1165232:118430211843021184856555Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative oxidoreductase3e-0962.4
NC_017046:1164176:118306211830621183616555Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-0962.4
NC_010465:2383219:240234324023432402903561Yersinia pseudotuberculosis YPIII, complete genomecytoplasmic chaperone TorD family protein2e-0962.4
NC_011094:1166271:118515611851561185710555Salmonella enterica subsp. enterica serovar Schwarzengrund strchaperone, TorD family protein6e-0961.2
NC_010067:1782998:178443417844341784988555Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-0960.8
NC_014541:2736641:275208527520852752690606Ferrimonas balearica DSM 9799 chromosome, complete genomecytoplasmic chaperone TorD family protein1e-0860.5
NC_010468:2809125:280971828097182810272555Escherichia coli ATCC 8739, complete genomecytoplasmic chaperone TorD family protein8e-0960.5
AC_000091:1083798:109988110998811100435555Escherichia coli W3110 DNA, complete genomehypothetical protein8e-0960.5
NC_000913:1087062:109886310988631099417555Escherichia coli K12, complete genomehypothetical protein8e-0960.5
NC_015968:1709680:171495817149581715512555Enterobacter asburiae LF7a chromosome, complete genomecytoplasmic chaperone TorD family protein1e-0860.1
NC_004337:1065609:107452110745211075075555Shigella flexneri 2a str. 301, complete genomeputative oxidoreductase component2e-0859.3
NC_004347:4541742:455705445570544557683630Shewanella oneidensis MR-1, complete genomehypothetical protein3e-0858.5
NC_008258:1076922:109390110939011094455555Shigella flexneri 5 str. 8401, complete genomeputative oxidoreductase component6e-0857.8
NC_015663:3466471:350106435010643501618555Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative oxidoreductase component2e-0755.8
NC_016816:2782373:278825527882552788824570Pantoea ananatis LMG 5342, complete genomecytoplasmic chaperone TorD family protein3e-0755.5
NC_011274:2044000:204403220440322044529498Salmonella enterica subsp. enterica serovar Gallinarum str. 287/917e-0650.8