Pre_GI: BLASTP Hits

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Query: NC_004631:3841975:3861959 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 3861959, End: 3862384, Length: 426

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:3991551:399204739920473992490444Salmonella enterica subsp. enterica serovar Typhimurium str. 798PTS system transporter protein8e-77285
NC_003197:3971905:397190539719053972330426Salmonella typhimurium LT2, complete genomeputative phosphotransferase system enzyme IIA1e-76284
NC_006511:3759550:376004637600463760471426Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative PTS system protein1e-76284
NC_011149:3895921:389641738964173896842426Salmonella enterica subsp. enterica serovar Agona str. SL483,PTS system fructose IIA component1e-76284
NC_003198:3855157:387646938764693876894426Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative PTS system protein1e-76284
NC_011083:3985618:398611439861143986539426Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,PTS system fructose IIA component1e-76284
NC_011147:3755725:375572537557253756150426Salmonella enterica subsp. enterica serovar Paratyphi A strPTS system protein1e-76284
NC_016856:3985597:398559739855973986022426Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative PTS system transporter subunitA1e-76284
NC_010102:3919999:391999939199993920424426Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-76283
NC_009792:4693152:471199147119914712398408Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-66249
NC_011742:3799788:380937038093703809771402Escherichia coli S88 chromosome, complete genomePTS system mannose/fructose-specific transporter subunit IIA1e-1168.6
NC_015389:1782825:180551718055171805924408Coriobacterium glomerans PW2 chromosome, complete genomePTS system fructose subfamily IIA component8e-1165.9
NC_014377:1897857:191152019115201911942423Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system fructose subfamily IIA component1e-1065.1
NC_014377:1897857:190872119087211909122402Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system fructose subfamily IIA component3e-1063.9
NC_015389:809474:819101819101819532432Coriobacterium glomerans PW2 chromosome, complete genomePTS system fructose subfamily IIA component6e-0959.3
NC_013192:2434664:245430424543042454747444Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit1e-0858.9
NC_015519:270637:289790289790290194405Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA3e-0857
NC_010814:2275199:231105023110502311442393Geobacter lovleyi SZ, complete genomePTS system fructose subfamily IIA component7e-0855.8
NC_014100:172452:193231193231193665435Caulobacter segnis ATCC 21756 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA9e-0855.5
NC_007946:3855445:386190438619043862236333Escherichia coli UTI89, complete genomeputative phosphotransferase system protein1e-0755.5
NC_008563:3888232:389469138946913895023333Escherichia coli APEC O1, complete genomehypothetical protein1e-0755.5
NC_013192:469771:485291485291486280990Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit1e-0755.1
NC_013198:394000:418021418021418449429Lactobacillus rhamnosus GG, complete genomePTS system, mannose-specific IIAB component1e-0755.1
NC_010380:124655:148006148006148410405Streptococcus pneumoniae Hungary19A-6, complete genomephosphotransferase system sugar-specific EII component9e-0752.4
NC_008344:554229:554229554229554633405Nitrosomonas eutropha C91, complete genomePTS system fructose subfamily IIA component1e-0652
NC_009089:581655:581655581655582062408Clostridium difficile 630, complete genomePTS system, IIa component2e-0651.2
NC_015425:841754:863224863224863643420Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA4e-0650.4
NC_011660:2509362:251816925181692519134966Listeria monocytogenes HCC23 chromosome, complete genomePTS system mannose-specific eiiab component (eiiab-man)4e-0650.4
NC_009442:1158268:116773711677371168171435Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose-specific component IIA5e-0650.1
NC_014334:2696000:270607127060712706511441Lactobacillus casei str. Zhang chromosome, complete genomePTS system transporter subunit IIA6e-0649.7
NC_002937:1706000:171588917158891716326438Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePTS system, IIA component9e-0648.9