Pre_GI: BLASTP Hits

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Query: NC_004631:3841975:3849865 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 3849865, End: 3850245, Length: 381

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:3905782:391840539184053918878474Salmonella enterica subsp. enterica serovar Paratyphi C strainphosphotransferase system mannitol/fructose-specific IIA domain protein5e-69259
NC_006511:3759550:377208037720803772553474Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein5e-69259
NC_006905:3913988:392361539236153924088474Salmonella enterica subsp. enterica serovar Choleraesuis strputative phosphotransferase system mannitol/fructose-specific IIA domain5e-69259
NC_011080:3941909:395453239545323955005474Salmonella enterica subsp. enterica serovar Newport str. SL254,putative phosphotransferase system mannitol/fructose-specific IIA domain5e-69259
NC_010102:3919999:393204239320423932515474Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-69259
NC_011147:3755725:376775937677593768232474Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein5e-69259
NC_003197:3971905:398394839839483984421474Salmonella typhimurium LT2, complete genomeputative phosphotransferase system mannitol/fructose-specific IIA domain1e-68258
NC_011149:3895921:390846039084603908933474Salmonella enterica subsp. enterica serovar Agona str. SL483,putative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 21e-68258
NC_016810:3993863:400526140052614005734474Salmonella enterica subsp. enterica serovar Typhimurium strputative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 21e-68258
NC_016856:3985597:399764039976403998113474Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphosphotransferase system mannitol/fructose-specific IIA component1e-68258
NC_016857:3993864:400526240052624005735474Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74beta-lactamase1e-68258
NC_016860:3995445:400684440068444007317474Salmonella enterica subsp. enterica serovar Typhimurium strputative PTS system EIIA protein1e-68258
NC_016863:3933848:394524739452473945720474Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phosphotransferase system mannitol/fructose-specific IIA component1e-68258
NC_017046:3991551:400408940040894004562474Salmonella enterica subsp. enterica serovar Typhimurium str. 798phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 21e-68258
NC_011083:3985618:399815739981573998630474Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 21e-68257
NC_011094:3853036:386566038656603866133474Salmonella enterica subsp. enterica serovar Schwarzengrund strphosphotransferase system mannitol/fructose-specific IIA domain2e-68257
NC_003198:3855157:386437538643753864755381Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-68257
NC_014650:2417509:242881224288122429279468Geobacillus sp. Y4.1MC1 chromosome, complete genomePTS IIA-like nitrogen-regulatory protein PtsN1e-1994.7
NC_002570:207555:209185209185209667483Bacillus halodurans C-125, complete genomePTS system, galactitol-specific enzyme II, A component3e-1890.5
NC_014377:1400544:141148014114801411953474Thermosediminibacter oceani DSM 16646 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-1788.2
NC_017179:2513804:252742625274262527884459Clostridium difficile BI1, complete genomePTS system galactitol-specific transporter subunit IIA1e-1685.1
NC_013315:2505792:251941425194142519872459Clostridium difficile CD196 chromosome, complete genomePTS system galactitol-specific transporter subunit IIA1e-1685.1
NC_013316:2585666:259997025999702600428459Clostridium difficile R20291, complete genomePTS system, galactitol-specific IIa component1e-1685.1
NC_009617:648000:651641651641652087447Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN1e-1478.6
NC_014039:15236:231912319123667477Propionibacterium acnes SK137 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 21e-1478.6
NC_021182:3771523:378625237862523786719468Clostridium pasteurianum BC1, complete genomephosphotransferase system mannitol/fructose-specifc IIA component (Ntr-type)1e-1478.6
NC_016516:15102:230572305723533477Propionibacterium acnes TypeIA2 P.acn33 chromosome, completePTS system galactitol-specific transporter subunit IIA1e-1478.2
NC_016512:15102:230572305723533477Propionibacterium acnes TypeIA2 P.acn17 chromosome, completePTS system galactitol-specific transporter subunit IIA1e-1478.2
NC_006085:15246:232012320123677477Propionibacterium acnes KPA171202, complete genomePTS system, galactitol-specific IIA component1e-1478.2
NC_016511:15100:230552305523531477Propionibacterium acnes TypeIA2 P.acn31 chromosome, completePTS system galactitol-specific transporter subunit IIA5e-1476.3
NC_009617:234782:252039252039252506468Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS transporter subunit IIA-like nitrogen-regulatory protein PtsN7e-1475.9
NC_014363:8228:170481704817506459Olsenella uli DSM 7084 chromosome, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-1271.6
NC_003212:2814737:283133828313382831802465Listeria innocua Clip11262, complete genomehypothetical protein4e-1270.1
NC_003210:2721559:274039027403902740854465Listeria monocytogenes EGD-e, complete genomehypothetical protein5e-1269.7
NC_015389:616430:624292624292624759468Coriobacterium glomerans PW2 chromosome, complete genomePTS system IIA component, Gat family5e-1166.6
NC_008555:2628858:264543226454322645899468Listeria welshimeri serovar 6b str. SLCC5334, complete genomePTS system, IIA component1e-1065.1
NC_010468:1816359:182091418209141821372459Escherichia coli ATCC 8739, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN1e-0858.5
NC_009725:2517428:2538466253846625404181953Bacillus amyloliquefaciens FZB42, complete genomeManR2e-0754.7
NC_013517:1849912:185962918596291860096468Sebaldella termitidis ATCC 33386, complete genomeputative PTS IIA-like nitrogen-regulatory protein PtsN2e-0754.3
NC_017195:1230485:1247625124762512495711947Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH domain family2e-0754.3
NC_014976:3469395:3483227348322734851731947Bacillus subtilis BSn5 chromosome, complete genometranscriptional antiterminator2e-0754.3
NC_017188:2512357:2529314252931425312661953Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional antiterminator3e-0753.9
NC_017191:2514401:2531358253135825333101953Bacillus amyloliquefaciens XH7 chromosome, complete genomemannose operon transcriptional antiterminator3e-0753.9
NC_020244:1264500:1273750127375012756961947Bacillus subtilis XF-1, complete genometranscriptional regulator3e-0753.9
NC_011083:3171171:318477431847743185232459Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,pts system mannitol-specific eiicba component3e-0753.9
NC_019842:2575000:2592489259248925944411953Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,licABCH operon regulator5e-0753.1
NC_020272:1384525:1384525138452513864771953Bacillus amyloliquefaciens IT-45, complete genomeputative licABCH operon regulator5e-0753.1
NC_007712:2978000:298029729802972980752456Sodalis glossinidius str. 'morsitans', complete genomeputative PTS system galactitol-specific IIA component7e-0752.8