Pre_GI: BLASTP Hits

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Query: NC_004631:3809678:3827831 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 3827831, End: 3828361, Length: 531

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3798475:381662838166283817158531Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-101367
NC_003198:3824187:384234138423413842871531Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-101367
NC_011205:4038884:403888440388844039414531Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-100362
NC_011149:3930358:393035839303583930888531Salmonella enterica subsp. enterica serovar Agona str. SL483,f1651e-99361
NC_011294:3880500:388051438805143881044531Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-99360
NC_011274:3799696:381784438178443818374531Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-99360
NC_003197:4005857:400585740058574006387531Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-99360
NC_011080:3976441:397644139764413976971531Salmonella enterica subsp. enterica serovar Newport str. SL254,f1652e-99360
NC_006905:3942753:394551239455123946042531Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein3e-99360
NC_016810:4027170:402717040271704027700531Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-99360
NC_016831:3779611:379867537986753799205531Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-99360
NC_016856:4019549:401954940195494020079531Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-99360
NC_016857:4025767:402717140271714027701531Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein2e-99360
NC_016860:4110968:411096841109684111498531Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-99360
NC_016863:3967156:396715639671563967686531Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-99360
NC_017046:4025998:402599840259984026528531Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-99360
NC_011094:3887648:388764838876483888178531Salmonella enterica subsp. enterica serovar Schwarzengrund strf1656e-99359
NC_011083:4020000:402006640200664020596531Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,f1659e-99358
NC_011147:3789696:378969637896963790226531Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-96350
NC_006511:3794017:379401737940173794547531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein3e-96350
NC_004337:3590323:389711938971193897616498Shigella flexneri 2a str. 301, complete genomeputative transcriptional regulator4e-41167
NC_010067:2881448:2884562288456228857881227Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-23108
NC_003198:25807:4172041720429101191Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible sulfatase regulatory protein1e-22106
NC_004631:25807:4172041720429101191Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible sulfatase regulatory protein1e-22106
NC_016832:25807:4172341723429101188Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Chondroitin sulfate/heparin utilization regulation protein1e-22105
NC_010102:25893:3738037380385761197Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-21102
NC_009436:1648159:1662033166203316631781146Enterobacter sp. 638, complete genomeradical SAM protein1e-1995.5
NC_015164:1646753:1660453166045316616731221Bacteroides salanitronis DSM 18170 chromosome, complete genomeRadical SAM domain-containing protein2e-1788.2
NC_012917:2786283:2794102279410227953251224Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRadical SAM domain protein8e-1786.7
NC_016831:25760:4172141721429111191Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative sulfatase regulatory protein1e-1686.3
NC_016810:25803:4172341723429131191Salmonella enterica subsp. enterica serovar Typhimurium strsulfatase regulatory protein1e-1686.3
NC_011294:25569:4147741477426671191Salmonella enterica subsp. enterica serovar Enteritidis strsulfatase regulatory protein1e-1686.3
NC_011274:25692:4160841608427981191Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91sulfatase regulatory protein1e-1686.3
NC_011205:25805:4172141721429111191Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853chondroitin sulfate/heparin utilization regulation protein1e-1686.3
NC_003197:25803:4172341723429131191Salmonella typhimurium LT2, complete genomeputative arylsulfatase regulator1e-1686.3
NC_016856:25803:4172341723429131191Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative arylsulfatase regulator1e-1686.3
NC_016857:25803:4172341723429131191Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative arylsulfatase regulator1e-1686.3
NC_016863:25804:4172441724429141191Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative arylsulfatase regulator1e-1686.3
NC_011094:25762:4172241722429121191Salmonella enterica subsp. enterica serovar Schwarzengrund strchondroitin sulfate/heparin utilization regulation protein9e-1786.3
NC_016860:25758:4172641726429131188Salmonella enterica subsp. enterica serovar Typhimurium strputative sulfatase regulator protein1e-1686.3
NC_011147:25836:4173241732429191188Salmonella enterica subsp. enterica serovar Paratyphi A strsulfatase regulatory protein1e-1686.3
NC_011080:25751:4171741717429041188Salmonella enterica subsp. enterica serovar Newport str. SL254,chondroitin sulfate/heparin utilization regulation protein1e-1686.3
NC_006511:25796:4169241692428791188Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible sulfatase regulatory protein1e-1686.3
NC_017046:25758:4172341723429131191Salmonella enterica subsp. enterica serovar Typhimurium str. 798sulfatase regulatory protein1e-1686.3
NC_011149:25760:4172341723429101188Salmonella enterica subsp. enterica serovar Agona str. SL483,chondroitin sulfate/heparin utilization regulation protein1e-1685.5
NC_014364:3238374:3252286325228632535541269Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRadical SAM domain protein2e-1685.1
NC_013421:801542:8033468033468045691224Pectobacterium wasabiae WPP163, complete genomeRadical SAM domain protein3e-1581.3
NC_007613:1533024:1546090154609015472621173Shigella boydii Sb227, complete genomeputative enzyme1e-1479.3
CU928160:1579375:1586601158660115877581158Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-1479
NC_011741:1579375:1586601158660115877581158Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-1479
NC_008258:1750964:1759284175928417604411158Shigella flexneri 5 str. 8401, complete genomeputative enzyme3e-1478.2
NC_016822:1781644:1791691179169117928481158Shigella sonnei 53G, complete genomehypothetical protein3e-1478.2
NC_013361:2047170:2057849205784920590061158Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein3e-1478.2
NC_013364:1902761:1913440191344019145971158Escherichia coli O111:H- str. 11128, complete genomehypothetical protein3e-1478.2
NC_011751:1770376:1777602177760217787591158Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-1478.2
NC_004741:1792442:1797701179770117988581158Shigella flexneri 2a str. 2457T, complete genomeputative enzyme3e-1478.2
AP010958:1711656:1722335172233517234921158Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein3e-1478.2
NC_011750:1849561:1856788185678818579451158Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-1478.2
NC_011415:1669484:1676710167671016778671158Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-1478.2
NC_013353:1711656:1722335172233517234921158Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-1478.2
NC_010498:1659328:1671347167134716725041158Escherichia coli SMS-3-5, complete genomeradical SAM domain-containing protein2e-1478.2
NC_007384:1696831:1708718170871817098901173Shigella sonnei Ss046, complete genomeputative enzyme2e-1478.2
NC_004431:1754627:1765305176530517664771173Escherichia coli CFT073, complete genomeHypothetical protein ydeM2e-1478.2
CU928145:1684777:1692003169200316931601158Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein5e-1477.4
NC_009801:1678790:1689469168946916906261158Escherichia coli E24377A, complete genomeradical SAM domain protein5e-1477.4
CP002516:2395578:2416138241613824172951158Escherichia coli KO11, complete genomeRadical SAM domain protein5e-1477.4
CP002185:1681327:1688553168855316897101158Escherichia coli W, complete genomeconserved protein5e-1477.4
NC_011748:1684777:1692003169200316931601158Escherichia coli 55989, complete genomehypothetical protein5e-1477.4
NC_016902:2395578:2416138241613824172951158Escherichia coli KO11FL chromosome, complete genomeradical SAM protein5e-1477.4
NC_008563:1620943:1628169162816916293261158Escherichia coli APEC O1, complete genomehypothetical protein6e-1477
NC_011742:1574036:1581262158126215824191158Escherichia coli S88 chromosome, complete genomehypothetical protein6e-1477
NC_008253:1534840:1542066154206615432231158Escherichia coli 536, complete genomehypothetical protein YdeM6e-1477
NC_011601:1675000:1682279168227916834361158Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-1477
NC_007946:1632025:1639251163925116404231173Escherichia coli UTI89, complete genomehypothetical protein YdeM5e-1477
NC_002655:1966464:1986423198642319875951173Escherichia coli O157:H7 EDL933, complete genomeputative enzyme8e-1476.6
AC_000091:1574000:1581347158134715825041158Escherichia coli W3110 DNA, complete genomehypothetical protein1e-1376.3
NC_000913:1570431:1577657157765715788141158Escherichia coli K12, complete genomehypothetical protein1e-1376.3
NC_010468:2345781:2363076236307623642331158Escherichia coli ATCC 8739, complete genomeRadical SAM domain protein1e-1376.3
NC_009800:1589000:1596456159645615976131158Escherichia coli HS, complete genomeradical SAM domain protein1e-1376.3
NC_010473:1661000:1668252166825216694091158Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein1e-1376.3
NC_012759:1462490:1469716146971614708731158Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-1376.3
NC_012947:2228235:2246112224611222472691158Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeradical SAM protein1e-1376.3
NC_012967:1546000:1553584155358415547411158Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-1376.3
NC_002695:2091890:2100877210087721020341158Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein9e-1476.3
NC_011353:2004800:2015478201547820166351158Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeradical SAM domain-containing protein9e-1476.3
NC_013008:2007228:2014454201445420156111158Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein9e-1476.3
NC_013941:1894496:1905175190517519063471173Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-1375.1
NC_017243:554500:5667575667575679891233Brachyspira intermedia PWS/A chromosome, complete genomearylsulfatase activating protein AslB3e-1374.7
NC_014330:952500:9559639559639571981236Brachyspira pilosicoli 95/1000 chromosome, complete genomearylsulfatase activating protein AslB6e-1270.5
NC_019908:2247956:2260274226027422615091236Brachyspira pilosicoli P43/6/78 chromosome, complete genomearylsulfatase activating protein AslB1e-1169.7
NC_010658:1593137:160381616038161604460645Shigella boydii CDC 3083-94, complete genomeradical SAM domain protein1e-1168.9
NC_010067:1116148:1129362112936211305941233Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1167.4
NC_014364:667841:6754996754996766831185Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRadical SAM domain protein1e-1065.9
NC_010067:4418000:4418174441817444193581185Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0960.8
NC_015663:770485:7888507888507901451296Enterobacter aerogenes KCTC 2190 chromosome, complete genomeRadical SAM domain-containing protein7e-0960.1
NC_003552:3269000:3277504327750432788441341Methanosarcina acetivorans C2A, complete genomearylsulfatase regulator4e-0754.3
NC_014218:1619982:1634618163461816358711254Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeRadical SAM domain protein5e-0753.9
NC_020389:1936000:1943557194355719448761320Methanosarcina mazei Tuc01, complete genomeArylsulfatase regulatory protein5e-0753.9