Pre_GI: BLASTP Hits

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Query: NC_004631:2872192:2872192 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 2872192, End: 2873103, Length: 912

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:2859491:285949128594912860402912Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein SpaO2e-157555
NC_003198:2856596:288633528863352887246912Salmonella enterica subsp. enterica serovar Typhi str. CT18,type III secretion protein2e-157555
NC_003197:3005842:303433530343353035246912Salmonella typhimurium LT2, complete genometype III secretion protein1e-156552
NC_016810:3028421:305691130569113057822912Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein (associated with type III secretion and virulence)1e-156552
NC_016856:3026426:305457230545723055483912Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssurface presentation of antigens protein SpaO1e-156552
NC_016857:3028421:305691130569113057822912Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74surface presentation of antigens protein SpaO1e-156552
NC_016860:3029272:305776530577653058676912Salmonella enterica subsp. enterica serovar Typhimurium strsurface presentation of antigens protein SpaO1e-156552
NC_016863:2974333:300282530028253003736912Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1surface presentation of antigens protein SpaO1e-156552
NC_011147:2814664:284440728444072845318912Salmonella enterica subsp. enterica serovar Paratyphi A strsurface presentation of antigens protein SpaO5e-156550
NC_006511:2819128:284887128488712849782912Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtype III secretion protein5e-156550
NC_010102:2967464:299731729973172998228912Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-155548
NC_011080:2982346:301083930108393011750912Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein, YscQ/HrcQ family4e-155547
NC_011205:3078732:307873230787323079643912Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853surface presentation of antigens protein SpaO4e-155547
NC_011274:2909799:290979929097992910710912Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91surface presentation of antigens protein SpaO4e-155547
NC_011149:2912219:294286129428612943772912Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein, YscQ/HrcQ family5e-155546
NC_006905:2987863:298786329878632988774912Salmonella enterica subsp. enterica serovar Choleraesuis strtype III secretion protein1e-154545
NC_016831:2867766:289625928962592897170912Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsurface presentation of antigens protein (associated with type III secretion and virulence)1e-154545
NC_017046:3027161:305565130556513056550900Salmonella enterica subsp. enterica serovar Typhimurium str. 798surface presentation of antigens protein (associated with type III secretion and virulence)3e-154544
NC_011094:2913500:294153129415312942442912Salmonella enterica subsp. enterica serovar Schwarzengrund strsurface presentation of antigens protein SpaO6e-154543
NC_012125:2938519:296824629682462969145900Salmonella enterica subsp. enterica serovar Paratyphi C strainsurface presentation of antigens protein SpaO2e-152538
NC_011751:3285646:330988733098873310834948Escherichia coli UMN026 chromosome, complete genomesurface presentation of antigens protein SpaO4e-29128
NC_002695:3702344:372566037256603726646987Escherichia coli O157:H7 str. Sakai, complete genometype III secretion protein2e-26120
NC_002655:3769643:379296537929653793951987Escherichia coli O157:H7 EDL933, complete genometype III secretion protein2e-26120
NC_011353:3805819:383005738300573831043987Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-26120
NC_013008:3761467:378478337847833785769987Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesurface presentation of antigens protein SpaO2e-26120
CP002185:3167738:319311031931103194057948Escherichia coli W, complete genome5e-26118
CP002516:903241:912019912019912966948Escherichia coli KO11, complete genome5e-26118
NC_010468:906957:915739915739916686948Escherichia coli ATCC 8739, complete genometype III secretion system apparatus protein YscQ/HrcQ1e-24113
NC_009800:2995958:302233930223393023286948Escherichia coli HS, complete genometype III secretion apparatus protein EpaO1e-23110
NC_011415:3217796:324178732417873242359573Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein9e-2097.8
CU928160:3030324:305431730543173054889573Escherichia coli IAI1 chromosome, complete genomefragment of Type III secretion apparatus protein (partial)2e-1996.7
NC_011741:3030324:305431730543173054889573Escherichia coli IAI1 chromosome, complete genome2e-1996.7
AP010958:3474077:349806834980683498640573Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1996.7
NC_013353:3474077:349806834980683498640573Escherichia coli O103:H2 str. 12009, complete genome2e-1996.7
NC_013364:3552284:357628135762813576853573Escherichia coli O111:H- str. 11128, complete genome2e-1996.7
NC_011748:3196173:322012732201273220774648Escherichia coli 55989, complete genome7e-1994.7
CU928145:3196173:322012732201273220774648Escherichia coli 55989 chromosome, complete genomefragment of Type III secretion apparatus protein (part 2)7e-1994.7
NC_009801:3175714:319970331997033200275573Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaO28e-1994.4
NC_013971:2876733:289868528986852899611927Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein5e-0858.9
NC_013961:851044:871689871689872615927Erwinia amylovora, complete genomeSurface presentation of antigens protein spaO5e-0858.9
NC_012214:2221702:224349122434912244417927Erwinia pyrifoliae Ep1/96, complete genomeType III secretion apparatus2e-0757
NC_010694:2971170:299255029925502993476927Erwinia tasmaniensis, complete genomeType III secretion apparatus2e-0757